RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 INPP5BP32019 993 aa16.58■□□□□ 0.24
TNFSF13B-206ENST00000542136 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.24
TNFSF13B-206ENST00000542136 PUS7LQ9H0K6 701 aaKnown RBP16.58■□□□□ 0.24
TNFSF13B-206ENST00000542136 ELP3Q9H9T3 547 aa16.58■□□□□ 0.24
TNFSF13B-206ENST00000542136 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
TNFSF13B-206ENST00000542136 MBD4O95243 580 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 ALDH1A1P00352 501 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 GNAT2P19087 354 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 GTF2A2P52657 109 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 PPIL2Q13356 520 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 LCORLQ8N3X6 602 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 MS4A4AQ96JQ5 239 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 STRBPQ96SI9 672 aaKnown RBP16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 CFHR5Q9BXR6 569 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 TBC1D2Q9BYX2 928 aa16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 DCP1AQ9NPI6 582 aaPredicted RBP16.57■□□□□ 0.24
TNFSF13B-206ENST00000542136 GJA5P36382 358 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 FSD1Q9BTV5 496 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 ARMT1Q9H993 441 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 SERPINB13Q9UIV8 391 aa16.56■□□□□ 0.24
TNFSF13B-206ENST00000542136 MYH1P12882 1939 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 CXCL11O14625 94 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 FOXN1O15353 648 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 CETPP11597 493 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 PTPRAP18433 802 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 CAP2P40123 477 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 SNAPC2Q13487 334 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 NOM1Q5C9Z4 860 aaKnown RBP16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 OTUD7BQ6GQQ9 843 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 TATDN1Q6P1N9 297 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 CENPQQ7L2Z9 268 aaPredicted RBP16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 ZCCHC17Q9NP64 241 aaKnown RBP16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 PRDM10Q9NQV6 1147 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 RNF186Q9NXI6 227 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 KCNH4Q9UQ05 1017 aa16.55■□□□□ 0.24
TNFSF13B-206ENST00000542136 SLFNL1Q499Z3 407 aa16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 MCM9Q9NXL9 1143 aa16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 SAP30BPQ9UHR5 308 aaKnown RBP16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
TNFSF13B-206ENST00000542136 DDX60LQ5H9U9 1706 aaKnown RBP16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 IRF6O14896 467 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 CHGBP05060 677 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 NEFLP07196 543 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 ASNSP08243 561 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 GABPAQ06546 454 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 SBK1Q52WX2 424 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 AMOTL1Q8IY63 956 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 SDR42E1Q8WUS8 393 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
TNFSF13B-206ENST00000542136 SIPA1L1O43166 1804 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 GPAA1O43292 621 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 PRKAB2O43741 272 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 PLCD1P51178 756 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
TNFSF13B-206ENST00000542136 DOCK1Q14185 1865 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 USP17L21D6R901 530 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 HIP1O00291 1037 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 TRPA1O75762 1119 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 HSPA8P11142 646 aaKnown RBP16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 PDE4AP27815 886 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 MKRN3Q13064 507 aaKnown RBP16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 ARPP21Q9UBL0 812 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13B-206ENST00000542136 PCNTO95613 3336 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 CCL15-CCL14A0A0B4J2E2 113 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 USP17L5A8MUK1 530 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 CCL15Q16663 113 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 PTPN18Q99952 460 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 NACAP1Q9BZK3 213 aa16.5■□□□□ 0.23
TNFSF13B-206ENST00000542136 M0R2C6 588 aa16.49■□□□□ 0.23
TNFSF13B-206ENST00000542136 IGF2BP3O00425 579 aaKnown RBP eCLIP16.49■□□□□ 0.23
TNFSF13B-206ENST00000542136 SLURP2P0DP57 97 aa16.49■□□□□ 0.23
TNFSF13B-206ENST00000542136 SDSP20132 328 aa16.49■□□□□ 0.23
TNFSF13B-206ENST00000542136 MFAP1P55081 439 aaKnown RBP16.49■□□□□ 0.23
TNFSF13B-206ENST00000542136 RRP1BQ14684 758 aaKnown RBP16.49■□□□□ 0.23
TNFSF13B-206ENST00000542136 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms