RNA–Protein interactions for RNA: ENST00000541846.5

LMO3-228, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LMO3, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-228ENST00000541846 CNTNAP1P78357 1384 aa14.8□□□□□ -0.04
LMO3-228ENST00000541846 ATRNL1Q5VV63 1379 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 RUFY3Q7L099 469 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 SH3BP5LQ7L8J4 393 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 TTC6Q86TZ1 520 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 NCOA7Q8NI08 942 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 NKX2-3Q8TAU0 364 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 FAM151AQ8WW52 585 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 DYNLL2Q96FJ2 89 aa14.79□□□□□ -0.04
LMO3-228ENST00000541846 RNF41Q9H4P4 317 aaPredicted RBP14.79□□□□□ -0.04
LMO3-228ENST00000541846 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.79□□□□□ -0.04
LMO3-228ENST00000541846 DDTLA6NHG4 134 aaPredicted RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 B4E1Z4 1266 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 SLC3A2P08195 630 aaKnown RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 FGRP09769 529 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 RPS6KB1P23443 525 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 TRDNQ13061 729 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 TNFAIP1Q13829 316 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 RALYLQ86SE5 291 aaKnown RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 LDHDQ86WU2 507 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 APOBEC3FQ8IUX4 373 aaKnown RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 MB21D2Q8IYB1 491 aaPredicted RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 ZNF526Q8TF50 670 aaPredicted RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 TTC14Q96N46 770 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 DHX36Q9H2U1 1008 aaKnown RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 CNNM2Q9H8M5 875 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 GPBP1L1Q9HC44 474 aaPredicted RBP14.78□□□□□ -0.04
LMO3-228ENST00000541846 GGA3Q9NZ52 723 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 CYP46A1Q9Y6A2 500 aa14.78□□□□□ -0.04
LMO3-228ENST00000541846 KIF3CO14782 793 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 ORC4O43929 436 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 CD2BP2O95400 341 aaKnown RBP14.77□□□□□ -0.05
LMO3-228ENST00000541846 HLA-DOAP06340 250 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 HMGB1P09429 215 aaKnown RBP14.77□□□□□ -0.05
LMO3-228ENST00000541846 POTEIP0CG38 1075 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 POTEJP0CG39 1038 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 PCP11498 1178 aaKnown RBP14.77□□□□□ -0.05
LMO3-228ENST00000541846 YY1P25490 414 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 RASA3Q14644 834 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
LMO3-228ENST00000541846 C16orf86Q6ZW13 317 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 DHX32Q7L7V1 743 aaKnown RBP14.77□□□□□ -0.05
LMO3-228ENST00000541846 METTL16Q86W50 562 aaKnown RBP14.77□□□□□ -0.05
LMO3-228ENST00000541846 ZSCAN29Q8IWY8 852 aaPredicted RBP14.77□□□□□ -0.05
LMO3-228ENST00000541846 SLC44A5Q8NCS7 719 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 TEPSINQ96N21 525 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 KRT23Q9C075 422 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 DEFB129Q9H1M3 183 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 TOMM22Q9NS69 142 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 PPP2R3BQ9Y5P8 575 aa14.77□□□□□ -0.05
LMO3-228ENST00000541846 ST18O60284 1047 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 KDM4AO75164 1064 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 PRDM1O75626 825 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 TNNI2P48788 182 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 ANTXR2P58335 489 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 EXOSC10Q01780 885 aaKnown RBP14.76□□□□□ -0.05
LMO3-228ENST00000541846 MAP3K10Q02779 954 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 GABPAQ06546 454 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 PDE4BQ07343 736 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 EAPPQ56P03 285 aaPredicted RBP14.76□□□□□ -0.05
LMO3-228ENST00000541846 CYB5R4Q7L1T6 521 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 IL27Q8NEV9 243 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 SNX21Q969T3 373 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 DCPSQ96C86 337 aaKnown RBP14.76□□□□□ -0.05
LMO3-228ENST00000541846 EHD4Q9H223 541 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 PDRG1Q9NUG6 133 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
LMO3-228ENST00000541846 PRC1O43663 620 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 MCM5P33992 734 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 CDK8P49336 464 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 AK2P54819 239 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 CDC37L1Q7L3B6 337 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 CHST3Q7LGC8 479 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 ZNF784Q8NCA9 323 aaPredicted RBP14.75□□□□□ -0.05
LMO3-228ENST00000541846 ESR2Q92731 530 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 TMEM39BQ9GZU3 492 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 PI4KBQ9UBF8 816 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 SERPINB13Q9UIV8 391 aa14.75□□□□□ -0.05
LMO3-228ENST00000541846 SCAF8Q9UPN6 1271 aaKnown RBP14.75□□□□□ -0.05
LMO3-228ENST00000541846 GREB1LQ9C091 1923 aaPredicted RBP14.74□□□□□ -0.05
LMO3-228ENST00000541846 WDR19Q8NEZ3 1342 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 SLURP2P0DP57 97 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 RASA1P20936 1047 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 KRT26Q7Z3Y9 468 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 SULF1Q8IWU6 871 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 CSRNP1Q96S65 589 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 LRRC2Q9BYS8 371 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 TBC1D2Q9BYX2 928 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 ALDH8A1Q9H2A2 487 aaPredicted RBP14.74□□□□□ -0.05
LMO3-228ENST00000541846 DNAJC18Q9H819 358 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 ZSWIM5Q9P217 1185 aa14.74□□□□□ -0.05
LMO3-228ENST00000541846 TBC1D12O60347 775 aa14.73□□□□□ -0.05
LMO3-228ENST00000541846 RANBP6O60518 1105 aaKnown RBP14.73□□□□□ -0.05
LMO3-228ENST00000541846 TOB2Q14106 344 aaPredicted RBP14.73□□□□□ -0.05
LMO3-228ENST00000541846 CHADLQ6NUI6 762 aa14.73□□□□□ -0.05
LMO3-228ENST00000541846 Q6ZUG5 572 aa14.73□□□□□ -0.05
LMO3-228ENST00000541846 NOL8Q76FK4 1167 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms