RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 DEXIO95424 95 aa11.94□□□□□ -0.5
GABRB3-204ENST00000541819 PPP2R3AQ06190 1150 aa11.94□□□□□ -0.5
GABRB3-204ENST00000541819 RUFY3Q7L099 469 aa11.94□□□□□ -0.5
GABRB3-204ENST00000541819 ATP2A3Q93084 1043 aa11.94□□□□□ -0.5
GABRB3-204ENST00000541819 HAUS8Q9BT25 410 aa11.94□□□□□ -0.5
GABRB3-204ENST00000541819 NUP58Q9BVL2 599 aa11.94□□□□□ -0.5
GABRB3-204ENST00000541819 SPDYE16A6NNV3 312 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-204ENST00000541819 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 EP400NLQ6ZTU2 488 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 SYCE1Q8N0S2 351 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ANKRD44Q8N8A2 993 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 MED10Q9BTT4 135 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 TTF2Q9UNY4 1162 aaKnown RBP11.93□□□□□ -0.5
GABRB3-204ENST00000541819 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
GABRB3-204ENST00000541819 RABGAP1Q9Y3P9 1069 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ADGRF5Q8IZF2 1346 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 BCRP11274 1271 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 XRCC6P12956 609 aaKnown RBP eCLIP11.93□□□□□ -0.5
GABRB3-204ENST00000541819 CD19P15391 556 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 PLCB1Q9NQ66 1216 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 KRT3P12035 628 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 PDE6BP35913 854 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 FAM160A1Q05DH4 1040 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 PLCH2O75038 1416 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ADCY7P51828 1080 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ZYXQ15942 572 aaKnown RBP11.93□□□□□ -0.5
GABRB3-204ENST00000541819 PIK3AP1Q6ZUJ8 805 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 RPS6KA2Q15349 733 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 MAEAQ7L5Y9 396 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 IGSF22Q8N9C0 903 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 VCX3AQ9NNX9 186 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 RALGAPBQ86X10 1494 aa11.93□□□□□ -0.5
GABRB3-204ENST00000541819 ESYT2A0FGR8 921 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 ANO3Q9BYT9 981 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 KCNG1Q9UIX4 513 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 BUB1BO60566 1050 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 HIBADHP31937 336 aaKnown RBP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 KIF22Q14807 665 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 SKAP1Q86WV1 359 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 C10orf67Q8IYJ2 551 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 MYCT1Q8N699 235 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 LINS1Q8NG48 757 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 SECISBP2LQ93073 1101 aaKnown RBP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 DACT3Q96B18 629 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 PFDN6O15212 129 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 TXKP42681 527 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 AK2P54819 239 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 VSIG1Q86XK7 387 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 DNM3Q9UQ16 869 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 IRX3P78415 501 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 SLC9C1Q4G0N8 1177 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 CPSF2Q9P2I0 782 aaKnown RBP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 SYNRGQ9UMZ2 1314 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 TNRQ92752 1358 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 SND1Q7KZF4 910 aaKnown RBP eCLIP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 CSGALNACT2Q8N6G5 542 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 GTF3C6Q969F1 213 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 RBSNQ9H1K0 784 aa11.92□□□□□ -0.5
GABRB3-204ENST00000541819 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.92□□□□□ -0.5
GABRB3-204ENST00000541819 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 VPS16Q9H269 839 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 MAGI1Q96QZ7 1491 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-204ENST00000541819 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-204ENST00000541819 RBBP5Q15291 538 aaKnown RBP11.91□□□□□ -0.5
GABRB3-204ENST00000541819 TMCO4Q5TGY1 634 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 PSPC1Q8WXF1 523 aaKnown RBP11.91□□□□□ -0.5
GABRB3-204ENST00000541819 TMEM87BQ96K49 555 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 A6NNZ2 444 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 TXNDC9O14530 226 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 EXOC3O60645 756 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 PAK1Q13153 545 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 TUBB8Q3ZCM7 444 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
GABRB3-204ENST00000541819 TRIM56Q9BRZ2 755 aaKnown RBP11.91□□□□□ -0.5
GABRB3-204ENST00000541819 PPP1R12CQ9BZL4 782 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 TIAM1Q13009 1591 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 KRT15P19012 456 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 RNASE9P60153 205 aaKnown RBP11.91□□□□□ -0.5
GABRB3-204ENST00000541819 MTMR3Q13615 1198 aa11.91□□□□□ -0.5
GABRB3-204ENST00000541819 A0A1B0GUA9 196 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 GOLGA8CPA6NN73 597 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 KRT81Q14533 505 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 P3H4Q92791 437 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 TRIM31Q9BZY9 425 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 VPS37BQ9H9H4 285 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 YARSP54577 528 aaKnown RBP11.9□□□□□ -0.5
GABRB3-204ENST00000541819 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
GABRB3-204ENST00000541819 SNX29Q8TEQ0 813 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms