RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 TICAM2Q86XR7 235 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 CRIPAKQ8N1N5 446 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 ZNF775Q96BV0 537 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 ESYT1Q9BSJ8 1104 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 RTFDC1Q9BY42 306 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 COA1Q9GZY4 146 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 CD209Q9NNX6 404 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 ZNF277Q9NRM2 450 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 TOR4AQ9NXH8 423 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 LTBP3Q9NS15 1303 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 MED23Q9ULK4 1368 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 FER1L6Q2WGJ9 1857 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 SNED1Q8TER0 1413 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 AVPP01185 164 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 LMNB1P20700 586 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 PRELPP51888 382 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 MDM2Q00987 491 aaPredicted RBP7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 SLC9C2Q5TAH2 1124 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 SPTY2D1Q68D10 685 aaPredicted RBP7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 RNF19BQ6ZMZ0 732 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 ERICH6Q7L0X2 663 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 TDRD7Q8NHU6 1098 aaKnown RBP7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 WDR66Q8TBY9 1149 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 FAM227BQ96M60 508 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 PIH1D3Q9NQM4 214 aaKnown RBP7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 AAASQ9NRG9 546 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 JAG2Q9Y219 1238 aa7.98□□□□□ -1.13
CLTCL1-206ENST00000540896 TTC24A2A3L6 582 aaPredicted RBP7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 WNT7AO00755 349 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 SGSM2O43147 1006 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 PPIP5K2O43314 1243 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 IARSP41252 1262 aaKnown RBP7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 AOC3Q16853 763 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 C9orf131Q5VYM1 1079 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 LARGE2Q8N3Y3 721 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 ZGPATQ8N5A5 531 aaKnown RBP7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 MAGEB6Q8N7X4 407 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 JDP2Q8WYK2 163 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 C22orf23Q9BZE7 217 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 VPS33BQ9H267 617 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 PRDM9Q9NQV7 894 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 HELLSQ9NRZ9 838 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 RNF181Q9P0P0 153 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 IRS2Q9Y4H2 1338 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 DUOX1Q9NRD9 1551 aa7.97□□□□□ -1.13
CLTCL1-206ENST00000540896 LTBP1Q14766 1721 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 A0A0D9SFI3 127 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 LDHBP07195 334 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 IL1R1P14778 569 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 PDE6AP16499 860 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 MCCP23508 829 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 ADD2P35612 726 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 GTF2IP78347 998 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 KIAA2012Q0VF49 1180 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 MCMDC2Q4G0Z9 681 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 ZMYM1Q5SVZ6 1142 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 NAA16Q6N069 864 aaPredicted RBP7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 PODNQ7Z5L7 613 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 DZIP1Q86YF9 867 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 TBC1D22AQ8WUA7 517 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 APPBP2Q92624 585 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 SEC62Q99442 399 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 REPIN1Q9BWE0 567 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 DBNDD1Q9H9R9 158 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 GPCPD1Q9NPB8 672 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 RBM19Q9Y4C8 960 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 ZNF532Q9HCE3 1301 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 SBF1O95248 1867 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 RFX7Q2KHR2 1363 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 CCDC88AQ3V6T2 1871 aa7.96□□□□□ -1.14
CLTCL1-206ENST00000540896 AXIN1O15169 862 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 ECE2O60344 883 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 DXOO77932 396 aaKnown RBP7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 CHGBP05060 677 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 CYP7A1P22680 504 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 GSTO1P78417 241 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 MECOMQ03112 1051 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 UBE3CQ15386 1083 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 MFSD14BQ5SR56 506 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 TTLL5Q6EMB2 1281 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 CCDC129Q6ZRS4 1044 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 NIM1KQ8IY84 436 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 SNIP1Q8TAD8 396 aaKnown RBP7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 AIDAQ96BJ3 306 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 USP26Q9BXU7 913 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 PDS5AQ29RF7 1337 aaKnown RBP7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 RAD50Q92878 1312 aa7.95□□□□□ -1.14
CLTCL1-206ENST00000540896 A0A1B0GUL6 1792 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 F8W031 263 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 M0R2C6 588 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 APPP05067 770 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 LDHCP07864 332 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 ANP32AP39687 249 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 TRIM32Q13049 653 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 OSBP2Q969R2 916 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 CCDC102AQ96A19 550 aa7.94□□□□□ -1.14
CLTCL1-206ENST00000540896 NOL10Q9BSC4 688 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms