RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PI4KBQ9UBF8 816 aa20.44■□□□□ 0.86
CD9-209ENST00000540891 SAP30BPQ9UHR5 308 aaKnown RBP20.44■□□□□ 0.86
CD9-209ENST00000540891 GLRX3O76003 335 aaKnown RBP20.43■□□□□ 0.86
CD9-209ENST00000540891 USP5P45974 858 aa20.43■□□□□ 0.86
CD9-209ENST00000540891 METTL16Q86W50 562 aaKnown RBP20.43■□□□□ 0.86
CD9-209ENST00000540891 LNPKQ9C0E8 428 aa20.43■□□□□ 0.86
CD9-209ENST00000540891 DDX60LQ5H9U9 1706 aaKnown RBP20.43■□□□□ 0.86
CD9-209ENST00000540891 ERC2O15083 957 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 CTNND1O60716 968 aaKnown RBP20.42■□□□□ 0.86
CD9-209ENST00000540891 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 GTF2A2P52657 109 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 CFHR5Q9BXR6 569 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 R3HDMLQ9H3Y0 253 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 ARMT1Q9H993 441 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.42■□□□□ 0.86
CD9-209ENST00000540891 ZBTB47Q9UFB7 747 aaPredicted RBP20.42■□□□□ 0.86
CD9-209ENST00000540891 STAP2Q9UGK3 403 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 HERC5Q9UII4 1024 aaKnown RBP20.42■□□□□ 0.86
CD9-209ENST00000540891 MYH7P12883 1935 aa20.42■□□□□ 0.86
CD9-209ENST00000540891 MBD4O95243 580 aa20.41■□□□□ 0.86
CD9-209ENST00000540891 SLC4A8Q2Y0W8 1093 aa20.41■□□□□ 0.86
CD9-209ENST00000540891 SDR42E1Q8WUS8 393 aa20.41■□□□□ 0.86
CD9-209ENST00000540891 PUS7LQ9H0K6 701 aaKnown RBP20.41■□□□□ 0.86
CD9-209ENST00000540891 KCNH4Q9UQ05 1017 aa20.41■□□□□ 0.86
CD9-209ENST00000540891 DOCK1Q14185 1865 aa20.41■□□□□ 0.86
CD9-209ENST00000540891 CCL15-CCL14A0A0B4J2E2 113 aa20.4■□□□□ 0.86
CD9-209ENST00000540891 PTPRAP18433 802 aa20.4■□□□□ 0.86
CD9-209ENST00000540891 PDE1AP54750 535 aa20.4■□□□□ 0.86
CD9-209ENST00000540891 NUCB1Q02818 461 aa20.4■□□□□ 0.86
CD9-209ENST00000540891 CCL15Q16663 113 aa20.4■□□□□ 0.86
CD9-209ENST00000540891 ZSCAN25Q6NSZ9 544 aa20.4■□□□□ 0.86
CD9-209ENST00000540891 FOXP4Q8IVH2 680 aaPredicted RBP20.4■□□□□ 0.86
CD9-209ENST00000540891 CRNKL1Q9BZJ0 848 aaKnown RBP20.4■□□□□ 0.86
CD9-209ENST00000540891 MYH1P12882 1939 aa20.39■□□□□ 0.86
CD9-209ENST00000540891 PRKAB2O43741 272 aa20.39■□□□□ 0.85
CD9-209ENST00000540891 ALDH1A1P00352 501 aa20.39■□□□□ 0.85
CD9-209ENST00000540891 HLA-DOAP06340 250 aa20.39■□□□□ 0.85
CD9-209ENST00000540891 SNAPC2Q13487 334 aa20.39■□□□□ 0.85
CD9-209ENST00000540891 CCDC84Q86UT8 332 aaPredicted RBP20.39■□□□□ 0.85
CD9-209ENST00000540891 CHD1LQ86WJ1 897 aa20.39■□□□□ 0.85
CD9-209ENST00000540891 DCP1AQ9NPI6 582 aaPredicted RBP20.39■□□□□ 0.85
CD9-209ENST00000540891 CETPP11597 493 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 CAP2P40123 477 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 PLCD1P51178 756 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 JAG1P78504 1218 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 EVX2Q03828 476 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 MOGSQ13724 837 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 PICK1Q9NRD5 415 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 ZHX2Q9Y6X8 837 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 NAV1Q8NEY1 1877 aa20.38■□□□□ 0.85
CD9-209ENST00000540891 PHIPQ8WWQ0 1821 aa20.37■□□□□ 0.85
CD9-209ENST00000540891 RNF113AO15541 343 aaKnown RBP20.37■□□□□ 0.85
CD9-209ENST00000540891 SHROOM1Q2M3G4 852 aaPredicted RBP20.37■□□□□ 0.85
CD9-209ENST00000540891 CRACR2BQ8N4Y2 399 aaPredicted RBP20.37■□□□□ 0.85
CD9-209ENST00000540891 APPBP2Q92624 585 aa20.37■□□□□ 0.85
CD9-209ENST00000540891 OSBP2Q969R2 916 aa20.37■□□□□ 0.85
CD9-209ENST00000540891 EHD4Q9H223 541 aa20.37■□□□□ 0.85
CD9-209ENST00000540891 AFG3L2Q9Y4W6 797 aa20.37■□□□□ 0.85
CD9-209ENST00000540891 CASP8AP2Q9UKL3 1982 aa20.37■□□□□ 0.85
CD9-209ENST00000540891 BTBD19C9JJ37 291 aa20.36■□□□□ 0.85
CD9-209ENST00000540891 NOM1Q5C9Z4 860 aaKnown RBP20.36■□□□□ 0.85
CD9-209ENST00000540891 OTUD7BQ6GQQ9 843 aa20.36■□□□□ 0.85
CD9-209ENST00000540891 TTC6Q86TZ1 520 aa20.36■□□□□ 0.85
CD9-209ENST00000540891 MCM9Q9NXL9 1143 aa20.36■□□□□ 0.85
CD9-209ENST00000540891 ATAD5Q96QE3 1844 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 GPR25O00155 361 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 CXCL11O14625 94 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 ZFYP08048 801 aaPredicted RBP20.35■□□□□ 0.85
CD9-209ENST00000540891 CYP2D6P10635 497 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 GABPAQ06546 454 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 CRHR2Q13324 411 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 TATDN1Q6P1N9 297 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 PLEKHM2Q8IWE5 1019 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 TNS4Q8IZW8 715 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 ZNF296Q8WUU4 475 aaPredicted RBP20.35■□□□□ 0.85
CD9-209ENST00000540891 STRBPQ96SI9 672 aaKnown RBP20.35■□□□□ 0.85
CD9-209ENST00000540891 FSD1Q9BTV5 496 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 ATP8A2Q9NTI2 1148 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
CD9-209ENST00000540891 A0A0G2JLL6 359 aaPredicted RBP20.34■□□□□ 0.85
CD9-209ENST00000540891 M0R2C6 588 aa20.34■□□□□ 0.85
CD9-209ENST00000540891 GDF11O95390 407 aa20.34■□□□□ 0.85
CD9-209ENST00000540891 PRRT2Q7Z6L0 340 aaPredicted RBP20.34■□□□□ 0.85
CD9-209ENST00000540891 SLC4A4Q9Y6R1 1079 aa20.34■□□□□ 0.85
CD9-209ENST00000540891 SMIM22K7EJ46 135 aa20.33■□□□□ 0.85
CD9-209ENST00000540891 POLR3DP05423 398 aaPredicted RBP20.33■□□□□ 0.85
CD9-209ENST00000540891 SHMT1P34896 483 aa20.33■□□□□ 0.85
CD9-209ENST00000540891 SEC62Q99442 399 aaKnown RBP20.33■□□□□ 0.85
CD9-209ENST00000540891 TRIM34Q9BYJ4 488 aa20.33■□□□□ 0.85
CD9-209ENST00000540891 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
CD9-209ENST00000540891 TAF1CQ15572 869 aaPredicted RBP20.32■□□□□ 0.84
CD9-209ENST00000540891 ZMYM1Q5SVZ6 1142 aa20.32■□□□□ 0.84
CD9-209ENST00000540891 GPAT2Q6NUI2 795 aa20.32■□□□□ 0.84
CD9-209ENST00000540891 ANKRD23Q86SG2 305 aa20.32■□□□□ 0.84
CD9-209ENST00000540891 EVI5LQ96CN4 794 aa20.32■□□□□ 0.84
CD9-209ENST00000540891 ZCCHC17Q9NP64 241 aaKnown RBP20.32■□□□□ 0.84
CD9-209ENST00000540891 ZBTB21Q9ULJ3 1066 aa20.32■□□□□ 0.84
CD9-209ENST00000540891 PTPRFP10586 1907 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms