RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 EFCC1Q9HA90 598 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 UNCXA6NJT0 531 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 ZBTB48P10074 688 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-214ENST00000540865 FSHRP23945 695 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 GRM5P41594 1212 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 MMP14P50281 582 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 RPS8P62241 208 aaKnown RBP6.04□□□□□ -1.44
SNHG1-214ENST00000540865 SEMA3FQ13275 785 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 PRAMEF18Q5VWM3 479 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 OTUD7BQ6GQQ9 843 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 NBPF11Q86T75 865 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 CD99L2Q8TCZ2 262 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 CDK15Q96Q40 435 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 KCTD15Q96SI1 283 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-214ENST00000540865 THUMPD2Q9BTF0 503 aaKnown RBP6.04□□□□□ -1.44
SNHG1-214ENST00000540865 C1orf115Q9H7X2 142 aa6.04□□□□□ -1.44
SNHG1-214ENST00000540865 USP17L3A6NCW0 530 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 USP17L4A6NCW7 530 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 PIK3CDO00329 1044 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 IGF2BP3O00425 579 aaKnown RBP eCLIP6.03□□□□□ -1.44
SNHG1-214ENST00000540865 UFL1O94874 794 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 ADH1CP00326 375 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 NR3C2P08235 984 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 SP3Q02447 781 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 SUZ12Q15022 739 aaKnown RBP6.03□□□□□ -1.44
SNHG1-214ENST00000540865 ARHGEF6Q15052 776 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 PROSER3Q2NL68 480 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 NBPF9Q3BBW0 867 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 TSGA10IPQ3SY00 556 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 COPS6Q7L5N1 327 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 USP17L1Q7RTZ2 530 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 PODNQ7Z5L7 613 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 OGFOD1Q8N543 542 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 ANKIB1Q9P2G1 1089 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 CEP126Q9P2H0 1117 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 GGA1Q9UJY5 639 aa6.03□□□□□ -1.44
SNHG1-214ENST00000540865 SCAF8Q9UPN6 1271 aaKnown RBP6.03□□□□□ -1.44
SNHG1-214ENST00000540865 H3BM21 787 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 WNT10BO00744 389 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 NEFMP07197 916 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 EIF2S2P20042 333 aaKnown RBP6.02□□□□□ -1.45
SNHG1-214ENST00000540865 CRHR2Q13324 411 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 PRKG1Q13976 671 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 MAP3K11Q16584 847 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 SLC4A8Q2Y0W8 1093 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 SLC9C1Q4G0N8 1177 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 INTS6LQ5JSJ4 861 aaKnown RBP6.02□□□□□ -1.45
SNHG1-214ENST00000540865 TRIM46Q7Z4K8 759 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 APOBEC3FQ8IUX4 373 aaKnown RBP6.02□□□□□ -1.45
SNHG1-214ENST00000540865 XAGE3Q8WTP9 111 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 CALR3Q96L12 384 aaKnown RBP6.02□□□□□ -1.45
SNHG1-214ENST00000540865 PRO3102Q9H379 93 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 ANGEL1Q9UNK9 670 aaKnown RBP6.02□□□□□ -1.45
SNHG1-214ENST00000540865 MAP4K5Q9Y4K4 846 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 WASF2Q9Y6W5 498 aa6.02□□□□□ -1.45
SNHG1-214ENST00000540865 MYO3BQ8WXR4 1341 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 CLSPNQ9HAW4 1339 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 UNC80Q8N2C7 3258 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 VCANP13611 3396 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 A0A1W2PPC1 479 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 PPP1R12BO60237 982 aaPredicted RBP6.01□□□□□ -1.45
SNHG1-214ENST00000540865 ANXA1P04083 346 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 HSP90B1P14625 803 aaKnown RBP6.01□□□□□ -1.45
SNHG1-214ENST00000540865 ATP2B4P23634 1241 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 AIMP1Q12904 312 aaKnown RBP6.01□□□□□ -1.45
SNHG1-214ENST00000540865 TRIM28Q13263 835 aaKnown RBP6.01□□□□□ -1.45
SNHG1-214ENST00000540865 NNTQ13423 1086 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 NBPF20Q3BBV1 942 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 DACT2Q5SW24 774 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 DPF3Q92784 378 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 FAM89AQ96GI7 184 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 WNK4Q96J92 1243 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 UCN2Q96RP3 112 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 ISCA1Q9BUE6 129 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 TMPRSS4Q9NRS4 437 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 BABAM1Q9NWV8 329 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 TSPYL4Q9UJ04 414 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 PTCH2Q9Y6C5 1203 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 NUP98P52948 1817 aa6.01□□□□□ -1.45
SNHG1-214ENST00000540865 XDHP47989 1333 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 SPTBN5Q9NRC6 3674 aaKnown RBP6□□□□□ -1.45
SNHG1-214ENST00000540865 LRRC37AA6NMS7 1700 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 ESPNB1AK53 854 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 IRS4O14654 1257 aaPredicted RBP6□□□□□ -1.45
SNHG1-214ENST00000540865 SOX11P35716 441 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 CAP1Q01518 475 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 CNGB1Q14028 1251 aaPredicted RBP6□□□□□ -1.45
SNHG1-214ENST00000540865 NFE2L2Q16236 605 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 STRIP1Q5VSL9 837 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 NPAS3Q8IXF0 933 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 PLBD2Q8NHP8 589 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 CLMNQ96JQ2 1002 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 CCDC85AQ96PX6 553 aaPredicted RBP6□□□□□ -1.45
SNHG1-214ENST00000540865 DEFB129Q9H1M3 183 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 CDV3Q9UKY7 258 aaKnown RBP6□□□□□ -1.45
SNHG1-214ENST00000540865 PPP2R3BQ9Y5P8 575 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 LAMB4A4D0S4 1761 aa6□□□□□ -1.45
SNHG1-214ENST00000540865 POLR2AP24928 1970 aaKnown RBP6□□□□□ -1.45
SNHG1-214ENST00000540865 COL1A1P02452 1464 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-214ENST00000540865 WTIPA6NIX2 430 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms