RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
CDCA3-208ENST00000540683 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 DDTLA6NHG4 134 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 CYP2E1P05181 493 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 ASNSP08243 561 aa12.62□□□□□ -0.39
CDCA3-208ENST00000540683 CYP7A1P22680 504 aa12.62□□□□□ -0.39
CDCA3-208ENST00000540683 PI16Q6UXB8 463 aa12.62□□□□□ -0.39
CDCA3-208ENST00000540683 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 PROCA1Q8NCQ7 364 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 EAF2Q96CJ1 260 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 GPATCH3Q96I76 525 aa12.62□□□□□ -0.39
CDCA3-208ENST00000540683 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
CDCA3-208ENST00000540683 CCDC8Q9H0W5 538 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 SNRKQ9NRH2 765 aa12.62□□□□□ -0.39
CDCA3-208ENST00000540683 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDCA3-208ENST00000540683 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
CDCA3-208ENST00000540683 DOCK1Q14185 1865 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 CAPN2P17655 700 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 ZAP70P43403 619 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 USP5P45974 858 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
CDCA3-208ENST00000540683 SLC9C1Q4G0N8 1177 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 TTC6Q86TZ1 520 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
CDCA3-208ENST00000540683 DDRGK1Q96HY6 314 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
CDCA3-208ENST00000540683 USP17L5A8MUK1 530 aa12.6□□□□□ -0.39
CDCA3-208ENST00000540683 CAP2P40123 477 aa12.6□□□□□ -0.39
CDCA3-208ENST00000540683 LRRFIP1Q32MZ4 808 aaKnown RBP12.6□□□□□ -0.39
CDCA3-208ENST00000540683 ZSCAN25Q6NSZ9 544 aa12.6□□□□□ -0.39
CDCA3-208ENST00000540683 ZFPM1Q8IX07 1006 aa12.6□□□□□ -0.39
CDCA3-208ENST00000540683 SH3RF3Q8TEJ3 882 aaPredicted RBP12.6□□□□□ -0.39
CDCA3-208ENST00000540683 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
CDCA3-208ENST00000540683 LRRCC1Q9C099 1032 aa12.6□□□□□ -0.39
CDCA3-208ENST00000540683 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
CDCA3-208ENST00000540683 DDX4Q9NQI0 724 aaKnown RBP12.6□□□□□ -0.39
CDCA3-208ENST00000540683 OSBPP22059 807 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 GCLCP48506 637 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-208ENST00000540683 FCGRTP55899 365 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 SH3BP5LQ7L8J4 393 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-208ENST00000540683 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 ZNF280CQ8ND82 737 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 ARMC5Q96C12 935 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 CRNKL1Q9BZJ0 848 aaKnown RBP12.59□□□□□ -0.39
CDCA3-208ENST00000540683 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-208ENST00000540683 AGTPBP1Q9UPW5 1226 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-208ENST00000540683 FLT1P17948 1338 aa12.59□□□□□ -0.39
CDCA3-208ENST00000540683 TRIM75PA6NK02 468 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 C19orf81C9J6K1 198 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
CDCA3-208ENST00000540683 SOX10P56693 466 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 C17orf99Q6UX52 265 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
CDCA3-208ENST00000540683 ZNF384Q8TF68 577 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 GTF3C2Q8WUA4 911 aaPredicted RBP12.58□□□□□ -0.4
CDCA3-208ENST00000540683 EHD4Q9H223 541 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 IL1RAPL2Q9NP60 686 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 FOCADQ5VW36 1801 aa12.58□□□□□ -0.4
CDCA3-208ENST00000540683 MAGEB6P1A0A0J9YX57 407 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 ATP5JP18859 108 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 AAMPQ13685 434 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 SLC9C2Q5TAH2 1124 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 MAPKAPK5Q8IW41 473 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 RAET1EQ8TD07 263 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 WDR18Q9BV38 432 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 CABP5Q9NP86 173 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
CDCA3-208ENST00000540683 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
CDCA3-208ENST00000540683 SERPINB13Q9UIV8 391 aa12.57□□□□□ -0.4
CDCA3-208ENST00000540683 APBB1O00213 710 aa12.56□□□□□ -0.4
CDCA3-208ENST00000540683 PSMC4P43686 418 aa12.56□□□□□ -0.4
CDCA3-208ENST00000540683 SPP2Q13103 211 aa12.56□□□□□ -0.4
CDCA3-208ENST00000540683 COA7Q96BR5 231 aa12.56□□□□□ -0.4
CDCA3-208ENST00000540683 PAG1Q9NWQ8 432 aa12.56□□□□□ -0.4
CDCA3-208ENST00000540683 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
CDCA3-208ENST00000540683 USP14P54578 494 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 UBXN2AP68543 259 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 IRX3P78415 501 aaPredicted RBP12.55□□□□□ -0.4
CDCA3-208ENST00000540683 FAM110CQ1W6H9 321 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 SLC4A8Q2Y0W8 1093 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 GPAT2Q6NUI2 795 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 DNAJC2Q99543 621 aaKnown RBP12.55□□□□□ -0.4
CDCA3-208ENST00000540683 ATP8A2Q9NTI2 1148 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 SRRDQ9UH36 339 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 PALD1Q9ULE6 856 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
CDCA3-208ENST00000540683 GOLIM4O00461 696 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 BCRP11274 1271 aa12.54□□□□□ -0.4
CDCA3-208ENST00000540683 PDE6AP16499 860 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms