RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 PRELPP51888 382 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 RTKN2Q8IZC4 609 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 CERS5Q8N5B7 392 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 IGDCC4Q8TDY8 1250 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 C7orf43Q8WVR3 580 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 ESR2Q92731 530 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 LLPHQ9BRT6 129 aaKnown RBP11.19□□□□□ -0.62
PAAF1-209ENST00000540659 KCNQ5Q9NR82 932 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 TTF2Q9UNY4 1162 aaKnown RBP11.19□□□□□ -0.62
PAAF1-209ENST00000540659 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 TCHHQ07283 1943 aa11.19□□□□□ -0.62
PAAF1-209ENST00000540659 LTBP3Q9NS15 1303 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 SCN9AQ15858 1988 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 GPR75-ASB3A0A0A6YYF3 556 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 GOLGA8AA7E2F4 631 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 CPLX1O14810 134 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 ZBTB43O43298 467 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 POLR3DP05423 398 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-209ENST00000540659 SLC3A2P08195 630 aaKnown RBP11.18□□□□□ -0.62
PAAF1-209ENST00000540659 PDCP20941 246 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 EVCP57679 992 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 PPP4CP60510 307 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 SART3Q15020 963 aaKnown RBP11.18□□□□□ -0.62
PAAF1-209ENST00000540659 CCDC93Q567U6 631 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 FAM47AQ5JRC9 791 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 SYNE3Q6ZMZ3 975 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 FERMT3Q86UX7 667 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 AMOTL1Q8IY63 956 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
PAAF1-209ENST00000540659 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 LMBRD1Q9NUN5 540 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 RNF181Q9P0P0 153 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 CNPY2Q9Y2B0 182 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 SUGT1Q9Y2Z0 365 aa11.18□□□□□ -0.62
PAAF1-209ENST00000540659 TNKSO95271 1327 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 NT5C2P49902 561 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 HMGN5P82970 282 aaKnown RBP11.17□□□□□ -0.62
PAAF1-209ENST00000540659 GUCY1B3Q02153 619 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 PICALMQ13492 652 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 GSE1Q14687 1217 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 SBK1Q52WX2 424 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 APOA5Q6Q788 366 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 DYNLL2Q96FJ2 89 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 DAGLAQ9Y4D2 1042 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 SLC12A7Q9Y666 1083 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 DDX49Q9Y6V7 483 aaKnown RBP11.17□□□□□ -0.62
PAAF1-209ENST00000540659 MYH8P13535 1937 aa11.17□□□□□ -0.62
PAAF1-209ENST00000540659 PSME4Q14997 1843 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 GAKO14976 1311 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
PAAF1-209ENST00000540659 PLCG2P16885 1265 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 LMNB1P20700 586 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 CDC27P30260 824 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
PAAF1-209ENST00000540659 LIFRP42702 1097 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 MMP14P50281 582 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 PDE4BQ07343 736 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 SKOR2Q2VWA4 1001 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-209ENST00000540659 PODNQ7Z5L7 613 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 NUP133Q8WUM0 1156 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 ZSCAN10Q96SZ4 725 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-209ENST00000540659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
PAAF1-209ENST00000540659 KIF3AQ9Y496 699 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 ATP6V1DQ9Y5K8 247 aa11.16□□□□□ -0.62
PAAF1-209ENST00000540659 FLT1P17948 1338 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 FIBPO43427 364 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 DEKP35659 375 aaKnown RBP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 PLCD1P51178 756 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 RBM5P52756 815 aaKnown RBP eCLIP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 RHBDL3P58872 404 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 DNM1Q05193 864 aaKnown RBP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 IFIT1BQ5T764 474 aaKnown RBP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 C12orf60Q5U649 245 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 FAM173BQ6P4H8 233 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 USP48Q86UV5 1035 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 SGMS1Q86VZ5 419 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 IQCA1Q86XH1 822 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 KIAA0825Q8IV33 1275 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 MKNK2Q9HBH9 465 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 USP40Q9NVE5 1235 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 ORC3Q9UBD5 711 aaPredicted RBP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 MKRN1Q9UHC7 482 aaKnown RBP11.15□□□□□ -0.62
PAAF1-209ENST00000540659 MYH6P13533 1939 aa11.15□□□□□ -0.62
PAAF1-209ENST00000540659 COL4A5P29400 1685 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 ORC4O43929 436 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 NMT2O60551 498 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms