RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 MGAMO43451 1857 aa11.15□□□□□ -0.63
TRAPPC1-202ENST00000540486 TAF5LO75529 589 aa11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 IGKV5-2P06315 115 aa11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 TDRD7Q8NHU6 1098 aaKnown RBP11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 ASB2Q96Q27 587 aa11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 MRIQ9BWK5 157 aa11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 PLA2G12BQ9BX93 195 aa11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 RPAP1Q9BWH6 1393 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC1-202ENST00000540486 ARAP2Q8WZ64 1704 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 A0A0G2JLL6 359 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 F6X3S4 739 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 CSF1RP07333 972 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 SHHQ15465 462 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 FAM110CQ1W6H9 321 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 MAP3K21Q5TCX8 1036 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 PRRT2Q7Z6L0 340 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 ADAMTS19Q8TE59 1207 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 UHRF1Q96T88 793 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
TRAPPC1-202ENST00000540486 DDX60LQ5H9U9 1706 aaKnown RBP11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 H7C1W4 665 aa11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 CACNB3P54284 484 aa11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 MRPS5P82675 430 aaKnown RBP11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 TRIM32Q13049 653 aa11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 CWF19L2Q2TBE0 894 aaKnown RBP11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 ANKRD13CQ8N6S4 541 aa11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 TEKT1Q969V4 418 aa11.12□□□□□ -0.63
TRAPPC1-202ENST00000540486 ZBED9Q6R2W3 1325 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 CT47B1P0C2W7 299 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 ALDH1L2Q3SY69 923 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 ZDHHC15Q96MV8 337 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 THEGQ9P2T0 379 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
TRAPPC1-202ENST00000540486 HIBADHP31937 336 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 RARSP54136 660 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 C9orf50Q5SZB4 431 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 BEND3Q5T5X7 828 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 GADL1Q6ZQY3 521 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 FAM151AQ8WW52 585 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 PNMA3Q9UL41 463 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 AFG3L2Q9Y4W6 797 aa11.1□□□□□ -0.63
TRAPPC1-202ENST00000540486 XRCC5P13010 732 aaKnown RBP11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 GCLCP48506 637 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 GRIN2CQ14957 1233 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 APOBEC3HQ6NTF7 200 aaKnown RBP11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 LINS1Q8NG48 757 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 TBC1D22AQ8WUA7 517 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 TRIB2Q92519 343 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 SENP6Q9GZR1 1112 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 PICK1Q9NRD5 415 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 DOCK3Q8IZD9 2030 aa11.09□□□□□ -0.63
TRAPPC1-202ENST00000540486 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 PTPRAP18433 802 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 CASP7P55210 303 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 IFIT5Q13325 482 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 UBE4AQ14139 1066 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 GCKRQ14397 625 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 ALYREFQ86V81 257 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 SCYL3Q8IZE3 742 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 FAM84BQ96KN1 310 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 NOB1Q9ULX3 412 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 AGTPBP1Q9UPW5 1226 aa11.08□□□□□ -0.64
TRAPPC1-202ENST00000540486 MYH3P11055 1940 aa11.07□□□□□ -0.64
TRAPPC1-202ENST00000540486 BCAR3O75815 825 aa11.07□□□□□ -0.64
TRAPPC1-202ENST00000540486 CACNB2Q08289 660 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC1-202ENST00000540486 SMC4Q9NTJ3 1288 aa11.07□□□□□ -0.64
TRAPPC1-202ENST00000540486 SUGT1Q9Y2Z0 365 aa11.07□□□□□ -0.64
TRAPPC1-202ENST00000540486 MAST3O60307 1309 aa11.07□□□□□ -0.64
TRAPPC1-202ENST00000540486 CYP2B6P20813 491 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 PDE3AQ14432 1141 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 GRIK5Q16478 980 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 SLC4A10Q6U841 1118 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 SOCS4Q8WXH5 440 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 GAS2L1Q99501 681 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 ZNF576Q9H609 170 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 PTPRCP08575 1304 aa11.06□□□□□ -0.64
TRAPPC1-202ENST00000540486 DNAH12Q6ZR08 3092 aa11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 PHF20L1A8MW92 1017 aa11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 PLIN1O60240 522 aa11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 GYG1P46976 350 aa11.05□□□□□ -0.64
TRAPPC1-202ENST00000540486 RTP1P59025 263 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms