RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 APPBP2Q92624 585 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 PUS7LQ9H0K6 701 aaKnown RBP8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 OSBPL5Q9H0X9 879 aaPredicted RBP8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 GBA2Q9HCG7 927 aaPredicted RBP8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 TLL2Q9Y6L7 1015 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 GREB1LQ9C091 1923 aaPredicted RBP8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 DDTLA6NHG4 134 aaPredicted RBP8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 RASSF10A6NK89 507 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 M0R2C6 588 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 MAP3K11Q16584 847 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 LRRFIP1Q32MZ4 808 aaKnown RBP8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 SUPT20HL1Q3ZLR7 823 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 ZMYM1Q5SVZ6 1142 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 SAPCD2Q86UD0 394 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 TICAM2Q86XR7 235 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 MAPKAPK5Q8IW41 473 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 OSBP2Q969R2 916 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 CSRNP1Q96S65 589 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 CRNKL1Q9BZJ0 848 aaKnown RBP8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 ARMT1Q9H993 441 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 MKRN1Q9UHC7 482 aaKnown RBP8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 FZD1Q9UP38 647 aa8.41□□□□□ -1.06
LPCAT3-209ENST00000540060 LOC285556D6RIA3 1793 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 SPDYE4A6NLX3 237 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 HUNKP57058 714 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 PRKG1Q13976 671 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 MOB2Q70IA6 237 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 C2orf69Q8N8R5 385 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 SDR42E1Q8WUS8 393 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 RILPL2Q969X0 211 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 HOOK2Q96ED9 719 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 HHIPL1Q96JK4 782 aa8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 SEC62Q99442 399 aaKnown RBP8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 ABT1Q9ULW3 272 aaKnown RBP8.4□□□□□ -1.06
LPCAT3-209ENST00000540060 A0A0D9SFI3 127 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 GPAA1O43292 621 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 PRKAB2O43741 272 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 USP2O75604 605 aaPredicted RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 SDSP20132 328 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 USP5P45974 858 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 NMIQ13287 307 aaPredicted RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 TTLL12Q14166 644 aaPredicted RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 LDLRAD1Q5T700 205 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 DCAF15Q66K64 600 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 ZSCAN29Q8IWY8 852 aaPredicted RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 FAM227BQ96M60 508 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 STRBPQ96SI9 672 aaKnown RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 DCP1AQ9NPI6 582 aaPredicted RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 ANGEL1Q9UNK9 670 aaKnown RBP8.39□□□□□ -1.07
LPCAT3-209ENST00000540060 UBE2Q2LH0YL09 131 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 FOXP2O15409 715 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 SLURP2P0DP57 97 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 IREB2P48200 963 aaKnown RBP8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 ARMC9Q7Z3E5 817 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 KLRG1Q96E93 195 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 ZNF341Q9BYN7 854 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 EPB41L4AQ9HCS5 686 aaPredicted RBP8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 ATP8A2Q9NTI2 1148 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 SAP30BPQ9UHR5 308 aaKnown RBP8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 PALD1Q9ULE6 856 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 SLC4A4Q9Y6R1 1079 aa8.38□□□□□ -1.07
LPCAT3-209ENST00000540060 ROBO3Q96MS0 1386 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 CCDC171Q6TFL3 1326 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 UNCXA6NJT0 531 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 GSG1L2A8MUP6 293 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 PHF20L1A8MW92 1017 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 FAM155AB1AL88 458 aaPredicted RBP8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 HIP1O00291 1037 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 TBC1D12O60347 775 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 SLC10A3P09131 477 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 GNAT2P19087 354 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 VGLL4Q14135 290 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 SLC4A8Q2Y0W8 1093 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 DEFB115Q30KQ5 88 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 MCMDC2Q4G0Z9 681 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 BMP2KLQ5H9B9 411 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 CYP4F22Q6NT55 531 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 RGMBQ6NW40 437 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 CCDC129Q6ZRS4 1044 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 MIGA2Q7L4E1 593 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 ZNF589Q86UQ0 364 aaPredicted RBP8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 METTL16Q86W50 562 aaKnown RBP8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 RASAL3Q86YV0 1011 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 ANKRD13AQ8IZ07 590 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 DNAJC5GQ8N7S2 189 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 CLMNQ96JQ2 1002 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms