RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 LBX1P52954 281 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 PLAURQ03405 335 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 ADGRE1Q14246 886 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 MBTPS1Q14703 1052 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 GRIK5Q16478 980 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 OCLNQ16625 522 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 TRAPPC3LQ5T215 181 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 ZCRB1Q8TBF4 217 aaKnown RBP5.65□□□□□ -1.5
C2CD3-214ENST00000540057 FAM200AQ8TCP9 573 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 TRPM4Q8TD43 1214 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 IFT43Q96FT9 208 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 NACC1Q96RE7 527 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 LPIN3Q9BQK8 851 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 NOVA2Q9UNW9 492 aaKnown RBP5.65□□□□□ -1.5
C2CD3-214ENST00000540057 CENPJQ9HC77 1338 aaPredicted RBP5.65□□□□□ -1.51
C2CD3-214ENST00000540057 FAM208AQ9UK61 1670 aaKnown RBP5.65□□□□□ -1.51
C2CD3-214ENST00000540057 USP31Q70CQ4 1352 aa5.65□□□□□ -1.51
C2CD3-214ENST00000540057 RGPD2P0DJD1 1756 aa5.65□□□□□ -1.51
C2CD3-214ENST00000540057 NSD3Q9BZ95 1437 aa5.65□□□□□ -1.51
C2CD3-214ENST00000540057 OPLAHO14841 1288 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 ELNP15502 786 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 VEGFAP15692 232 aaPredicted RBP5.64□□□□□ -1.51
C2CD3-214ENST00000540057 TARSP26639 723 aaKnown RBP5.64□□□□□ -1.51
C2CD3-214ENST00000540057 GPLD1P80108 840 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 C11orf91Q3C1V1 193 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 FOXD4L6Q3SYB3 417 aaPredicted RBP5.64□□□□□ -1.51
C2CD3-214ENST00000540057 FOXD4L3Q6VB84 417 aaPredicted RBP5.64□□□□□ -1.51
C2CD3-214ENST00000540057 DHX32Q7L7V1 743 aaKnown RBP5.64□□□□□ -1.51
C2CD3-214ENST00000540057 KRT25Q7Z3Z0 450 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 STK32AQ8WU08 396 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 C11orf16Q9NQ32 467 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 USP20Q9Y2K6 914 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 MAP2P11137 1827 aaKnown RBP5.64□□□□□ -1.51
C2CD3-214ENST00000540057 MEGF6O75095 1541 aa5.64□□□□□ -1.51
C2CD3-214ENST00000540057 MON2Q7Z3U7 1717 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 ITGB4P16144 1822 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 VIRMAQ69YN4 1812 aaKnown RBP5.63□□□□□ -1.51
C2CD3-214ENST00000540057 GLTPD2A6NH11 291 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 CCDC85CA6NKD9 419 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 DYRK3O43781 588 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 CPB1P15086 417 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 RFX1P22670 979 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 ELOAQ14241 798 aaKnown RBP5.63□□□□□ -1.51
C2CD3-214ENST00000540057 SWI5Q1ZZU3 235 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 FAM26DQ5JW98 314 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 COX20Q5RI15 118 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 PERM1Q5SV97 790 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 SHISA2Q6UWI4 295 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 FAM35AQ86V20 835 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 FMR1NBQ8N0W7 255 aaPredicted RBP5.63□□□□□ -1.51
C2CD3-214ENST00000540057 LTV1Q96GA3 475 aaPredicted RBP5.63□□□□□ -1.51
C2CD3-214ENST00000540057 PRIMPOLQ96LW4 560 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 FRRS1LQ9P0K9 344 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 RTCBQ9Y3I0 505 aaKnown RBP5.63□□□□□ -1.51
C2CD3-214ENST00000540057 CNTNAP1P78357 1384 aa5.63□□□□□ -1.51
C2CD3-214ENST00000540057 KTN1Q86UP2 1357 aaKnown RBP5.63□□□□□ -1.51
C2CD3-214ENST00000540057 C4AP0C0L4 1744 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 RGS9O75916 674 aaPredicted RBP5.62□□□□□ -1.51
C2CD3-214ENST00000540057 SASH3O75995 380 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 EGFRP00533 1210 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 HSPA8P11142 646 aaKnown RBP5.62□□□□□ -1.51
C2CD3-214ENST00000540057 MPRIPQ6WCQ1 1025 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 NME9Q86XW9 330 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 TREML1Q86YW5 311 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.62□□□□□ -1.51
C2CD3-214ENST00000540057 DMRTC2Q8IXT2 367 aaPredicted RBP5.62□□□□□ -1.51
C2CD3-214ENST00000540057 LINC00116Q8NCU8 138 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 IP6K1Q92551 441 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 VTI1AQ96AJ9 217 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 LENG1Q96BZ8 264 aaPredicted RBP5.62□□□□□ -1.51
C2CD3-214ENST00000540057 SAP130Q9H0E3 1048 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 CCDC87Q9NVE4 849 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 PIM2Q9P1W9 311 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 KCNMB2Q9Y691 235 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 KDM6AO15550 1401 aaPredicted RBP5.62□□□□□ -1.51
C2CD3-214ENST00000540057 CCDC88AQ3V6T2 1871 aa5.62□□□□□ -1.51
C2CD3-214ENST00000540057 C9orf172C9J069 976 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 PRMT3O60678 531 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 RARAP10276 462 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 NRLP54845 237 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 RAC1P63000 192 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 TMF1P82094 1093 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 DALRD3Q5D0E6 543 aaKnown RBP5.61□□□□□ -1.51
C2CD3-214ENST00000540057 EVC2Q86UK5 1308 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 TXNRD3Q86VQ6 643 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 ETFBKMTQ8IXQ9 262 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 NLGN1Q8N2Q7 840 aa5.61□□□□□ -1.51
C2CD3-214ENST00000540057 SMARCC1Q92922 1105 aaPredicted RBP5.61□□□□□ -1.51
C2CD3-214ENST00000540057 SSBP4Q9BWG4 385 aaPredicted RBP5.61□□□□□ -1.51
C2CD3-214ENST00000540057 TNRC18O15417 2968 aaPredicted RBP5.61□□□□□ -1.51
C2CD3-214ENST00000540057 TIAM2Q8IVF5 1701 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 SBNO2Q9Y2G9 1366 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 LOC102724428A0A0B4J2F2 783 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 TNFRSF10BO14763 440 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 HOXD8P13378 290 aaPredicted RBP5.6□□□□□ -1.51
C2CD3-214ENST00000540057 GYS1P13807 737 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 SIK1P57059 783 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 ITPK1Q13572 414 aa5.6□□□□□ -1.51
C2CD3-214ENST00000540057 TRIP4Q15650 581 aaPredicted RBP5.6□□□□□ -1.51
C2CD3-214ENST00000540057 PCSK7Q16549 785 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms