RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

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Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 KLHL42Q9P2K6 505 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 HIF3AQ9Y2N7 669 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 GAS2O43903 313 aaKnown RBP8.19□□□□□ -1.1
MRE11-209ENST00000540013 TRIM37O94972 964 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 ITGB2P05107 769 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 IBSPP21815 317 aaPredicted RBP8.19□□□□□ -1.1
MRE11-209ENST00000540013 BMP6P22004 513 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 ZNF252P-AS1Q0IIN9 211 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 TTBK2Q6IQ55 1244 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 NLGN1Q8N2Q7 840 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 C12orf50Q8NA57 414 aaPredicted RBP8.19□□□□□ -1.1
MRE11-209ENST00000540013 ACSBG1Q96GR2 724 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 GMLQ99445 158 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 PIF1Q9H611 641 aa8.19□□□□□ -1.1
MRE11-209ENST00000540013 SHROOM2Q13796 1616 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 AOC2O75106 756 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 PAGE1O75459 146 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 PROCP04070 461 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 GNL2Q13823 731 aaKnown RBP8.18□□□□□ -1.1
MRE11-209ENST00000540013 KIF4BQ2VIQ3 1234 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 SOGA3Q5TF21 947 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 MAP1SQ66K74 1059 aaPredicted RBP8.18□□□□□ -1.1
MRE11-209ENST00000540013 TMEM87AQ8NBN3 555 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 MEGF10Q96KG7 1140 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 SSBP4Q9BWG4 385 aaPredicted RBP8.18□□□□□ -1.1
MRE11-209ENST00000540013 YIPF2Q9BWQ6 316 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 CAPN10Q9HC96 672 aa8.18□□□□□ -1.1
MRE11-209ENST00000540013 DHX15O43143 795 aaKnown RBP8.17□□□□□ -1.1
MRE11-209ENST00000540013 TIAF1O95411 115 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 DLGAP3O95886 979 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 LIG3P49916 1009 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
MRE11-209ENST00000540013 RBL2Q08999 1139 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.17□□□□□ -1.1
MRE11-209ENST00000540013 HS2ST1Q7LGA3 356 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 UTP4Q969X6 686 aaKnown RBP8.17□□□□□ -1.1
MRE11-209ENST00000540013 TP53INP1Q96A56 240 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 FAM46AQ96IP4 442 aaKnown RBP8.17□□□□□ -1.1
MRE11-209ENST00000540013 CCDC86Q9H6F5 360 aaKnown RBP8.17□□□□□ -1.1
MRE11-209ENST00000540013 KIF27Q86VH2 1401 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 CUL7Q14999 1698 aa8.17□□□□□ -1.1
MRE11-209ENST00000540013 ECEL1O95672 775 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 CTSBP07858 339 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 ADH5P11766 374 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 ANAPC15P60006 121 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 ERCC6L2Q5T890 1561 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 AGMOQ6ZNB7 445 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 RELL1Q8IUW5 271 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 ZCRB1Q8TBF4 217 aaKnown RBP8.16□□□□□ -1.1
MRE11-209ENST00000540013 RNF34Q969K3 372 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 MYRFLQ96LU7 910 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 RSRP1Q9BUV0 290 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 WDR18Q9BV38 432 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
MRE11-209ENST00000540013 ZSWIM4Q9H7M6 989 aa8.16□□□□□ -1.1
MRE11-209ENST00000540013 MAGEC2Q9UBF1 373 aaPredicted RBP8.16□□□□□ -1.1
MRE11-209ENST00000540013 NOP58Q9Y2X3 529 aaKnown RBP8.16□□□□□ -1.1
MRE11-209ENST00000540013 H2AFB1P0C5Y9 115 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 H2AFB2P0C5Z0 115 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 FANCCQ00597 558 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 TCEAL1Q15170 157 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 STK35Q8TDR2 534 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 UBL7Q96S82 380 aaPredicted RBP8.15□□□□□ -1.1
MRE11-209ENST00000540013 KRTAP4-12Q9BQ66 201 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 ATXN3LQ9H3M9 355 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 CACNA2D2Q9NY47 1150 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 AP4E1Q9UPM8 1137 aa8.15□□□□□ -1.1
MRE11-209ENST00000540013 RUSC2Q8N2Y8 1516 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 LIG1P18858 919 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 ZNF76P36508 570 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 PREPP48147 710 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 USP11P51784 963 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 ID3Q02535 119 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 ZNF746Q6NUN9 644 aaPredicted RBP8.14□□□□□ -1.11
MRE11-209ENST00000540013 CCDC84Q86UT8 332 aaPredicted RBP8.14□□□□□ -1.11
MRE11-209ENST00000540013 PMFBP1Q8TBY8 1022 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 GPBAR1Q8TDU6 330 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 MIR1-1HGQ9H1L0 117 aa8.14□□□□□ -1.11
MRE11-209ENST00000540013 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
MRE11-209ENST00000540013 BTBD11A6QL63 1104 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 ZNF862O60290 1169 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 PARNO95453 639 aaKnown RBP8.13□□□□□ -1.11
MRE11-209ENST00000540013 DOC2BQ14184 412 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 MAP3K11Q16584 847 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 GRIN3AQ8TCU5 1115 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 MORC4Q8TE76 937 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 TMEM74Q96NL1 305 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 KRTAP9-9Q9BYP9 154 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 KRTAP9-4Q9BYQ2 154 aa8.13□□□□□ -1.11
MRE11-209ENST00000540013 HSD3B2P26439 372 aa8.12□□□□□ -1.11
MRE11-209ENST00000540013 GBP2P32456 591 aaPredicted RBP8.12□□□□□ -1.11
MRE11-209ENST00000540013 ERVK-24P63145 666 aa8.12□□□□□ -1.11
MRE11-209ENST00000540013 HSP90AB2PQ58FF8 381 aa8.12□□□□□ -1.11
MRE11-209ENST00000540013 RNF187Q5TA31 235 aaPredicted RBP8.12□□□□□ -1.11
MRE11-209ENST00000540013 DYMQ7RTS9 669 aa8.12□□□□□ -1.11
MRE11-209ENST00000540013 ERMP1Q7Z2K6 904 aa8.12□□□□□ -1.11
MRE11-209ENST00000540013 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
MRE11-209ENST00000540013 TRIM42Q8IWZ5 723 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms