RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 EVA1BQ9NVM1 165 aa9.74□□□□□ -0.85
LDHA-217ENST00000539814 DUOX1Q9NRD9 1551 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 SFI1A8K8P3 1242 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 SNAP23O00161 211 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 RECKO95980 971 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 RPS8P62241 208 aaKnown RBP9.73□□□□□ -0.85
LDHA-217ENST00000539814 RASSF7Q02833 373 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 GPR162Q16538 588 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 ZBTB33Q86T24 672 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 TPCN2Q8NHX9 752 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 DRC1Q96MC2 740 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 CDC5LQ99459 802 aaKnown RBP9.73□□□□□ -0.85
LDHA-217ENST00000539814 DCTN4Q9UJW0 460 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 LTBP1Q14766 1721 aa9.73□□□□□ -0.85
LDHA-217ENST00000539814 TLL1O43897 1013 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 TAF5LO75529 589 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 CDK11BP21127 795 aaKnown RBP9.72□□□□□ -0.85
LDHA-217ENST00000539814 ALDH1B1P30837 517 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
LDHA-217ENST00000539814 GPSM2P81274 684 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 PTPN12Q05209 780 aaKnown RBP9.72□□□□□ -0.85
LDHA-217ENST00000539814 MTX1Q13505 466 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 C7orf43Q8WVR3 580 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 CNNM1Q9NRU3 951 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 PDZRN3Q9UPQ7 1066 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 ATP6V0A2Q9Y487 856 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.72□□□□□ -0.85
LDHA-217ENST00000539814 FER1L6Q2WGJ9 1857 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 SNED1Q8TER0 1413 aa9.72□□□□□ -0.85
LDHA-217ENST00000539814 DXOO77932 396 aaKnown RBP9.71□□□□□ -0.86
LDHA-217ENST00000539814 KLRK1P26718 216 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 PRELPP51888 382 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 CHRNDQ07001 517 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 ARHGAP27Q6ZUM4 889 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 ZSCAN29Q8IWY8 852 aaPredicted RBP9.71□□□□□ -0.86
LDHA-217ENST00000539814 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.86
LDHA-217ENST00000539814 MPHOSPH8Q99549 860 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 MKNK1Q9BUB5 465 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 MINPP1Q9UNW1 487 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 EXOC6BQ9Y2D4 811 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 COL4A5P29400 1685 aa9.71□□□□□ -0.86
LDHA-217ENST00000539814 UTRNP46939 3433 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 EYA2O00167 538 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 NFKBIEO00221 500 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 LGR5O75473 907 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 BBOX1O75936 387 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 MSS51Q4VC12 460 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 ATG9AQ7Z3C6 839 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 SP8Q8IXZ3 490 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 SSH3Q8TE77 659 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 ZNF277Q9NRM2 450 aaPredicted RBP9.7□□□□□ -0.86
LDHA-217ENST00000539814 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
LDHA-217ENST00000539814 SEPT3Q9UH03 358 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 NSFL1CQ9UNZ2 370 aaKnown RBP9.7□□□□□ -0.86
LDHA-217ENST00000539814 HDAC5Q9UQL6 1122 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 DNMT3AQ9Y6K1 912 aaPredicted RBP9.7□□□□□ -0.86
LDHA-217ENST00000539814 CCDC88AQ3V6T2 1871 aa9.7□□□□□ -0.86
LDHA-217ENST00000539814 SURF6O75683 361 aaKnown RBP9.69□□□□□ -0.86
LDHA-217ENST00000539814 UFL1O94874 794 aa9.69□□□□□ -0.86
LDHA-217ENST00000539814 CCDC93Q567U6 631 aa9.69□□□□□ -0.86
LDHA-217ENST00000539814 METTL24Q5JXM2 366 aa9.69□□□□□ -0.86
LDHA-217ENST00000539814 SH3BP5LQ7L8J4 393 aa9.69□□□□□ -0.86
LDHA-217ENST00000539814 RPAP2Q8IXW5 612 aaPredicted RBP9.69□□□□□ -0.86
LDHA-217ENST00000539814 CHMP4BQ9H444 224 aaKnown RBP9.69□□□□□ -0.86
LDHA-217ENST00000539814 COPRSQ9NQ92 184 aa9.69□□□□□ -0.86
LDHA-217ENST00000539814 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
LDHA-217ENST00000539814 RIPOR2Q9Y4F9 1068 aa9.69□□□□□ -0.86
LDHA-217ENST00000539814 IGHDP01880 384 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 ARHGAP4P98171 946 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 TFCP2Q12800 502 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 OS9Q13438 667 aaPredicted RBP9.68□□□□□ -0.86
LDHA-217ENST00000539814 MTMR3Q13615 1198 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 ECM1Q16610 540 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 TSNAXIP1Q2TAA8 658 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 DPP8Q6V1X1 898 aaPredicted RBP9.68□□□□□ -0.86
LDHA-217ENST00000539814 MPNDQ8N594 471 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 TBC1D16Q8TBP0 767 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 HINFPQ9BQA5 517 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 TAOK3Q9H2K8 898 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 POLLQ9UGP5 575 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
LDHA-217ENST00000539814 XDHP47989 1333 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 SMARCA5O60264 1052 aaPredicted RBP9.67□□□□□ -0.86
LDHA-217ENST00000539814 CIAO1O76071 339 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 SASH1O94885 1247 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 FKBP4Q02790 459 aaKnown RBP eCLIP9.67□□□□□ -0.86
LDHA-217ENST00000539814 COL19A1Q14993 1142 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 AOC3Q16853 763 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 EAPPQ56P03 285 aaPredicted RBP9.67□□□□□ -0.86
LDHA-217ENST00000539814 TXNRD3Q86VQ6 643 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 VGLL2Q8N8G2 317 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 TMX4Q9H1E5 349 aaPredicted RBP9.67□□□□□ -0.86
LDHA-217ENST00000539814 PRDM9Q9NQV7 894 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 PCDHGA11Q9Y5H2 935 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 SBF1O95248 1867 aa9.67□□□□□ -0.86
LDHA-217ENST00000539814 ZNF804BA4D1E1 1349 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms