RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 DCAF15Q66K64 600 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 CDCA5Q96FF9 252 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 EHD4Q9H223 541 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 TAOK2Q9UL54 1235 aa18.34■□□□□ 0.53
DDB1-216ENST00000539739 BAZ2AQ9UIF9 1905 aaKnown RBP18.33■□□□□ 0.52
DDB1-216ENST00000539739 MCCP23508 829 aa18.33■□□□□ 0.52
DDB1-216ENST00000539739 USP26Q9BXU7 913 aa18.33■□□□□ 0.52
DDB1-216ENST00000539739 BACH2Q9BYV9 841 aa18.33■□□□□ 0.52
DDB1-216ENST00000539739 ZNF287Q9HBT7 754 aa18.33■□□□□ 0.52
DDB1-216ENST00000539739 HERC5Q9UII4 1024 aaKnown RBP18.33■□□□□ 0.52
DDB1-216ENST00000539739 ANAPC4Q9UJX5 808 aa18.33■□□□□ 0.52
DDB1-216ENST00000539739 SEC24BO95487 1268 aa18.32■□□□□ 0.52
DDB1-216ENST00000539739 HAND2P61296 217 aa18.32■□□□□ 0.52
DDB1-216ENST00000539739 CDAN1Q8IWY9 1227 aa18.32■□□□□ 0.52
DDB1-216ENST00000539739 UPF2Q9HAU5 1272 aaKnown RBP18.32■□□□□ 0.52
DDB1-216ENST00000539739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDB1-216ENST00000539739 SWAP70Q9UH65 585 aa18.32■□□□□ 0.52
DDB1-216ENST00000539739 TBC1D12O60347 775 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 PDE4BQ07343 736 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 MIGA2Q7L4E1 593 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
DDB1-216ENST00000539739 TRAF5O00463 557 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 PPP1R12BO60237 982 aaPredicted RBP18.31■□□□□ 0.52
DDB1-216ENST00000539739 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
DDB1-216ENST00000539739 CTDSPL2Q05D32 466 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 CREB3L3Q68CJ9 461 aa18.31■□□□□ 0.52
DDB1-216ENST00000539739 RNF41Q9H4P4 317 aaPredicted RBP18.31■□□□□ 0.52
DDB1-216ENST00000539739 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
DDB1-216ENST00000539739 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 CYP21A2P08686 494 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
DDB1-216ENST00000539739 MAP3K10Q02779 954 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 GABPAQ06546 454 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 FSTL1Q12841 308 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 GLIPR1L2Q4G1C9 344 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 C16orf86Q6ZW13 317 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 DYNLL2Q96FJ2 89 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 ZNF341Q9BYN7 854 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 ZNF408Q9H9D4 720 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 MKNK2Q9HBH9 465 aa18.3■□□□□ 0.52
DDB1-216ENST00000539739 SLC27A2O14975 620 aa18.29■□□□□ 0.52
DDB1-216ENST00000539739 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
DDB1-216ENST00000539739 HSPA4P34932 840 aa18.29■□□□□ 0.52
DDB1-216ENST00000539739 CDK8P49336 464 aa18.29■□□□□ 0.52
DDB1-216ENST00000539739 EVX2Q03828 476 aa18.29■□□□□ 0.52
DDB1-216ENST00000539739 AKNAD1Q5T1N1 836 aa18.29■□□□□ 0.52
DDB1-216ENST00000539739 MFSD6Q6ZSS7 791 aa18.29■□□□□ 0.52
DDB1-216ENST00000539739 SMIM22K7EJ46 135 aa18.28■□□□□ 0.52
DDB1-216ENST00000539739 TTLL12Q14166 644 aaPredicted RBP18.28■□□□□ 0.52
DDB1-216ENST00000539739 STAG1Q8WVM7 1258 aa18.28■□□□□ 0.52
DDB1-216ENST00000539739 CELF2O95319 508 aaKnown RBP18.27■□□□□ 0.52
DDB1-216ENST00000539739 IREB2P48200 963 aaKnown RBP18.27■□□□□ 0.52
DDB1-216ENST00000539739 TRDNQ13061 729 aa18.27■□□□□ 0.52
DDB1-216ENST00000539739 PRKG1Q13976 671 aa18.27■□□□□ 0.52
DDB1-216ENST00000539739 ARMC9Q7Z3E5 817 aa18.27■□□□□ 0.52
DDB1-216ENST00000539739 TOMM22Q9NS69 142 aa18.27■□□□□ 0.52
DDB1-216ENST00000539739 FAM196BA6NMK8 535 aa18.27■□□□□ 0.51
DDB1-216ENST00000539739 FMR1Q06787 632 aaKnown RBP eCLIP18.27■□□□□ 0.518e-8■■■■■ 30.5
DDB1-216ENST00000539739 KRT32Q14532 448 aa18.27■□□□□ 0.51
DDB1-216ENST00000539739 TATDN1Q6P1N9 297 aa18.27■□□□□ 0.51
DDB1-216ENST00000539739 TBC1D10CQ8IV04 446 aa18.27■□□□□ 0.51
DDB1-216ENST00000539739 ZNF444Q8N0Y2 327 aaPredicted RBP18.27■□□□□ 0.51
DDB1-216ENST00000539739 SLC44A5Q8NCS7 719 aa18.27■□□□□ 0.51
DDB1-216ENST00000539739 DNAJC18Q9H819 358 aa18.27■□□□□ 0.51
DDB1-216ENST00000539739 CNNM2Q9H8M5 875 aa18.27■□□□□ 0.51
DDB1-216ENST00000539739 LAMB1P07942 1786 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 SLURP2P0DP57 97 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 SHMT1P34896 483 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 NT5C2P49902 561 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 FKBP1BP68106 108 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 CERKLQ49MI3 558 aaPredicted RBP18.26■□□□□ 0.51
DDB1-216ENST00000539739 C2orf69Q8N8R5 385 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 PASKQ96RG2 1323 aa18.26■□□□□ 0.51
DDB1-216ENST00000539739 SSC5DA1L4H1 1573 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 E7EWF7 191 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 ORC4O43929 436 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
DDB1-216ENST00000539739 PRDM1O75626 825 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 FGRP09769 529 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
DDB1-216ENST00000539739 KCNB2Q92953 911 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 CCDC17Q96LX7 622 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 WRNIP1Q96S55 665 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 KRT23Q9C075 422 aa18.25■□□□□ 0.51
DDB1-216ENST00000539739 GBA2Q9HCG7 927 aaPredicted RBP18.25■□□□□ 0.51
DDB1-216ENST00000539739 ANGEL1Q9UNK9 670 aaKnown RBP18.25■□□□□ 0.51
DDB1-216ENST00000539739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
DDB1-216ENST00000539739 RALYLQ86SE5 291 aaKnown RBP18.24■□□□□ 0.51
DDB1-216ENST00000539739 ESR2Q92731 530 aa18.24■□□□□ 0.51
DDB1-216ENST00000539739 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
DDB1-216ENST00000539739 INCENPQ9NQS7 918 aa18.24■□□□□ 0.51
DDB1-216ENST00000539739 ZNF112Q9UJU3 913 aa18.24■□□□□ 0.51
DDB1-216ENST00000539739 SIPA1L1O43166 1804 aa18.24■□□□□ 0.51
DDB1-216ENST00000539739 PHF20L1A8MW92 1017 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms