RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CDKL5O76039 1030 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 WTAPQ15007 396 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 RTN1Q16799 776 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 RESP18Q5W5W9 173 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 SGMS1Q86VZ5 419 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 WDR19Q8NEZ3 1342 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 CAMTA2O94983 1202 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 MTERF4Q7Z6M4 381 aaKnown RBP16.21■□□□□ 0.19
UBE3B-210ENST00000539599 NOSTRINQ8IVI9 506 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 RAI14Q9P0K7 980 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 DISP2A7MBM2 1401 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
UBE3B-210ENST00000539599 POLR2DO15514 142 aaKnown RBP16.21■□□□□ 0.18
UBE3B-210ENST00000539599 FMNL1O95466 1100 aaPredicted RBP16.21■□□□□ 0.18
UBE3B-210ENST00000539599 SERPINC1P01008 464 aa16.21■□□□□ 0.18
UBE3B-210ENST00000539599 CFAP100Q494V2 611 aa16.21■□□□□ 0.18
UBE3B-210ENST00000539599 SYT10Q6XYQ8 523 aa16.21■□□□□ 0.18
UBE3B-210ENST00000539599 PPP1R13BQ96KQ4 1090 aa16.21■□□□□ 0.18
UBE3B-210ENST00000539599 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.18
UBE3B-210ENST00000539599 SERTAD1Q9UHV2 236 aa16.21■□□□□ 0.18
UBE3B-210ENST00000539599 ERVV-1B6SEH8 477 aa16.2■□□□□ 0.18
UBE3B-210ENST00000539599 FMR1Q06787 632 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBE3B-210ENST00000539599 FAM177A1Q8N128 213 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-210ENST00000539599 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
UBE3B-210ENST00000539599 NMT2O60551 498 aa16.2■□□□□ 0.18
UBE3B-210ENST00000539599 MMP1P03956 469 aa16.2■□□□□ 0.18
UBE3B-210ENST00000539599 SFPQP23246 707 aaKnown RBP eCLIP16.2■□□□□ 0.18
UBE3B-210ENST00000539599 UBASH3AP57075 661 aa16.2■□□□□ 0.18
UBE3B-210ENST00000539599 KRBA2Q6ZNG9 492 aa16.2■□□□□ 0.18
UBE3B-210ENST00000539599 OSBPL5Q9H0X9 879 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-210ENST00000539599 INTS13Q9NVM9 706 aa16.2■□□□□ 0.18
UBE3B-210ENST00000539599 LOC102724428A0A0B4J2F2 783 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 ADAMTS3O15072 1205 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 NTSR2O95665 410 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
UBE3B-210ENST00000539599 SIK1P57059 783 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 PPARAQ07869 468 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 ELF2Q15723 593 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 PTF1AQ7RTS3 328 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 TUBE1Q9UJT0 475 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 COL1A1P02452 1464 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-210ENST00000539599 FANCGO15287 622 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 PPP6R2O75170 966 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 PLEKHA8P1O95397 391 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 LIFRP42702 1097 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 ZNF654Q8IZM8 581 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 MARCH10Q8NA82 808 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-210ENST00000539599 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 STAMQ92783 540 aa16.19■□□□□ 0.18
UBE3B-210ENST00000539599 MYH14Q7Z406 1995 aaKnown RBP16.19■□□□□ 0.18
UBE3B-210ENST00000539599 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-210ENST00000539599 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-210ENST00000539599 IFNAR1P17181 557 aa16.18■□□□□ 0.18
UBE3B-210ENST00000539599 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-210ENST00000539599 TNKSO95271 1327 aa16.18■□□□□ 0.18
UBE3B-210ENST00000539599 DOT1LQ8TEK3 1739 aa16.18■□□□□ 0.18
UBE3B-210ENST00000539599 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-210ENST00000539599 ZHX1Q9UKY1 873 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-210ENST00000539599 CHD4Q14839 1912 aa16.18■□□□□ 0.18
UBE3B-210ENST00000539599 A0A087X0B3 334 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 MYL5Q02045 173 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 ALX1Q15699 326 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 CCDC152Q4G0S7 254 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 CRACR2BQ8N4Y2 399 aaPredicted RBP16.17■□□□□ 0.18
UBE3B-210ENST00000539599 KRI1Q8N9T8 703 aaKnown RBP16.17■□□□□ 0.18
UBE3B-210ENST00000539599 MED15Q96RN5 788 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 BPIFA3Q9BQP9 254 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
UBE3B-210ENST00000539599 PAXBP1Q9Y5B6 917 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 EP400Q96L91 3159 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 SMYD4Q8IYR2 804 aaPredicted RBP16.17■□□□□ 0.18
UBE3B-210ENST00000539599 FANCBQ8NB91 859 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 STAG1Q8WVM7 1258 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 EPSTI1Q96J88 318 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 MAN1B1Q9UKM7 699 aa16.17■□□□□ 0.18
UBE3B-210ENST00000539599 DDB1Q16531 1140 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 UBAC1Q9BSL1 405 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 BAZ2AQ9UIF9 1905 aaKnown RBP16.16■□□□□ 0.18
UBE3B-210ENST00000539599 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 NEMFO60524 1076 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 CUTAO60888 179 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 AFMP43652 599 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 JMYQ8N9B5 988 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 CELF1Q92879 486 aaKnown RBP16.16■□□□□ 0.18
UBE3B-210ENST00000539599 NACAP1Q9BZK3 213 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 KRT23Q9C075 422 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
UBE3B-210ENST00000539599 ERICH2A1L162 156 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 STX17P56962 302 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 GSDMDP57764 484 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 MDM2Q00987 491 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-210ENST00000539599 TRIM22Q8IYM9 498 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
UBE3B-210ENST00000539599 SAMSN1Q9NSI8 373 aaKnown RBP16.15■□□□□ 0.18
UBE3B-210ENST00000539599 NHSL1Q5SYE7 1610 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 MYH2Q9UKX2 1941 aa16.15■□□□□ 0.18
UBE3B-210ENST00000539599 LRP5O75197 1615 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms