RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 AK7Q96M32 723 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 CLIC6Q96NY7 704 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 PANX2Q96RD6 677 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 MAN1B1Q9UKM7 699 aa15.17■□□□□ 0.02
UBE3B-209ENST00000539584 AKAP11Q9UKA4 1901 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 IFIT3O14879 490 aaKnown RBP15.16■□□□□ 0.02
UBE3B-209ENST00000539584 SEMA3EO15041 775 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 NPHP1O15259 732 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 IDH1O75874 414 aaKnown RBP15.16■□□□□ 0.02
UBE3B-209ENST00000539584 BMP15O95972 392 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 CYP2C19P33261 490 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 CTSWP56202 376 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 MAP3K12Q12852 859 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 TC2NQ8N9U0 490 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 CABLES1Q8TDN4 633 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 SLC26A6Q9BXS9 759 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 NAPBQ9H115 298 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 FBXO2Q9UK22 296 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-209ENST00000539584 NFE2L3Q9Y4A8 694 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 MRFAP1Q9Y605 127 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 MROH5Q6ZUA9 1318 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 BMP6P22004 513 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 AKNAD1Q5T1N1 836 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 IFNL3Q8IZI9 196 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 CARD6Q9BX69 1037 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 NACAP1Q9BZK3 213 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 RNF41Q9H4P4 317 aaPredicted RBP15.16■□□□□ 0.02
UBE3B-209ENST00000539584 INTS13Q9NVM9 706 aa15.16■□□□□ 0.02
UBE3B-209ENST00000539584 ERICH2A1L162 156 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 PLA2G4AP47712 749 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 PLCD1P51178 756 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 GNG11P61952 73 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 NR1I3Q14994 352 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
UBE3B-209ENST00000539584 PI16Q6UXB8 463 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 RSRC2Q7L4I2 434 aaKnown RBP15.15■□□□□ 0.02
UBE3B-209ENST00000539584 DIS3L2Q8IYB7 885 aaKnown RBP15.15■□□□□ 0.02
UBE3B-209ENST00000539584 STAG1Q8WVM7 1258 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 UBXN6Q9BZV1 441 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 PIH1D3Q9NQM4 214 aaKnown RBP15.15■□□□□ 0.02
UBE3B-209ENST00000539584 RAI14Q9P0K7 980 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 ZSWIM5Q9P217 1185 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 TIAM2Q8IVF5 1701 aa15.15■□□□□ 0.02
UBE3B-209ENST00000539584 A0A1B0GTH6 734 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 TMEM232C9JQI7 657 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 CCDC175P0C221 793 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 XBP1P17861 261 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 RTN1Q16799 776 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 MFSD6Q6ZSS7 791 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 NLRP10Q86W26 655 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 ARFGAP3Q9NP61 516 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 TMOD3Q9NYL9 352 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 POLR2DO15514 142 aaKnown RBP15.14■□□□□ 0.01
UBE3B-209ENST00000539584 PDE8AO60658 829 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 PPP2R3AQ06190 1150 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 PDE4BQ07343 736 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 GPS2Q13227 327 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 MSL3Q8N5Y2 521 aaKnown RBP15.14■□□□□ 0.01
UBE3B-209ENST00000539584 LRRN4CLQ8ND94 238 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
UBE3B-209ENST00000539584 PNPLA7Q6ZV29 1317 aa15.13■□□□□ 0.01
UBE3B-209ENST00000539584 BTBD18B2RXH4 712 aa15.13■□□□□ 0.01
UBE3B-209ENST00000539584 AKR1B15C9JRZ8 316 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-209ENST00000539584 TUBBP07437 444 aa15.13■□□□□ 0.01
UBE3B-209ENST00000539584 TOB1P50616 345 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-209ENST00000539584 BRD3Q15059 726 aa15.13■□□□□ 0.01
UBE3B-209ENST00000539584 PDILTQ8N807 584 aa15.13■□□□□ 0.01
UBE3B-209ENST00000539584 PYM1Q9BRP8 204 aaKnown RBP15.13■□□□□ 0.01
UBE3B-209ENST00000539584 GREM2Q9H772 168 aa15.13■□□□□ 0.01
UBE3B-209ENST00000539584 PRDM11Q9NQV5 511 aa15.13■□□□□ 0.01
UBE3B-209ENST00000539584 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.01
UBE3B-209ENST00000539584 COL5A2P05997 1499 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-209ENST00000539584 CCDC151A5D8V7 595 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 RXRAP19793 462 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 FGFR2P21802 821 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 WTAPQ15007 396 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 SPATA1Q5VX52 437 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 CC2D1AQ6P1N0 951 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-209ENST00000539584 CRACR2BQ8N4Y2 399 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-209ENST00000539584 KIFC2Q96AC6 838 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-209ENST00000539584 FANCGO15287 622 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 ACTN4O43707 911 aaKnown RBP15.12■□□□□ 0.01
UBE3B-209ENST00000539584 FILIP1LQ4L180 1135 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 TXLNBQ8N3L3 684 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 CEP112Q8N8E3 955 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 SPATA5Q8NB90 893 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 HNRNPLLQ8WVV9 542 aaKnown RBP15.12■□□□□ 0.01
UBE3B-209ENST00000539584 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-209ENST00000539584 GSDMAQ96QA5 445 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 SERTAD1Q9UHV2 236 aa15.12■□□□□ 0.01
UBE3B-209ENST00000539584 ERVV-1B6SEH8 477 aa15.11■□□□□ 0.01
UBE3B-209ENST00000539584 IRS4O14654 1257 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-209ENST00000539584 SLC5A1P13866 664 aa15.11■□□□□ 0.01
UBE3B-209ENST00000539584 TXLNAP40222 546 aa15.11■□□□□ 0.01
UBE3B-209ENST00000539584 FERMT2Q96AC1 680 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms