RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SAPCD2Q86UD0 394 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 SLC44A5Q8NCS7 719 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCDC42-202ENST00000539522 DYNLL2Q96FJ2 89 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 CLMNQ96JQ2 1002 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 GBA2Q9HCG7 927 aaPredicted RBP15.57■□□□□ 0.08
CCDC42-202ENST00000539522 TLL2Q9Y6L7 1015 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 ROBO3Q96MS0 1386 aa15.57■□□□□ 0.08
CCDC42-202ENST00000539522 TMEM88BA6NKF7 163 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 TBC1D12O60347 775 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 CDC45O75419 566 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 FGAP02671 866 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 GNAT2P19087 354 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 INPP5BP32019 993 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 SHMT1P34896 483 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 ALX1Q15699 326 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 SUPT20HL1Q3ZLR7 823 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 ZSCAN29Q8IWY8 852 aaPredicted RBP15.56■□□□□ 0.08
CCDC42-202ENST00000539522 LSG1Q9H089 658 aaKnown RBP15.56■□□□□ 0.08
CCDC42-202ENST00000539522 EHD4Q9H223 541 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 DHX36Q9H2U1 1008 aaKnown RBP15.56■□□□□ 0.08
CCDC42-202ENST00000539522 INCENPQ9NQS7 918 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.56■□□□□ 0.08
CCDC42-202ENST00000539522 TAF6LQ9Y6J9 622 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 RAD50Q92878 1312 aa15.56■□□□□ 0.08
CCDC42-202ENST00000539522 PCNTO95613 3336 aa15.55■□□□□ 0.08
CCDC42-202ENST00000539522 TATDN1Q6P1N9 297 aa15.55■□□□□ 0.08
CCDC42-202ENST00000539522 PI4KBQ9UBF8 816 aa15.55■□□□□ 0.08
CCDC42-202ENST00000539522 ANGEL1Q9UNK9 670 aaKnown RBP15.55■□□□□ 0.08
CCDC42-202ENST00000539522 THSD7BQ9C0I4 1608 aa15.54■□□□□ 0.08
CCDC42-202ENST00000539522 ZMYM6O95789 1325 aa15.54■□□□□ 0.08
CCDC42-202ENST00000539522 HSPA6P17066 643 aa15.54■□□□□ 0.08
CCDC42-202ENST00000539522 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
CCDC42-202ENST00000539522 ZKSCAN4Q969J2 545 aaPredicted RBP15.54■□□□□ 0.08
CCDC42-202ENST00000539522 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
CCDC42-202ENST00000539522 CREBZFQ9NS37 354 aa15.54■□□□□ 0.08
CCDC42-202ENST00000539522 SNCAIPQ9Y6H5 919 aa15.54■□□□□ 0.08
CCDC42-202ENST00000539522 PTPRFP10586 1907 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 APPP05067 770 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 GJA5P36382 358 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 FKBP1BP68106 108 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 COL9A3Q14050 684 aaPredicted RBP15.53■□□□□ 0.08
CCDC42-202ENST00000539522 VGLL4Q14135 290 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 FOXP4Q8IVH2 680 aaPredicted RBP15.53■□□□□ 0.08
CCDC42-202ENST00000539522 MAP4K1Q92918 833 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 ZNF341Q9BYN7 854 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 ARPP21Q9UBL0 812 aaPredicted RBP15.53■□□□□ 0.08
CCDC42-202ENST00000539522 SERPINB13Q9UIV8 391 aa15.53■□□□□ 0.08
CCDC42-202ENST00000539522 RASSF10A6NK89 507 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 FAM155AB1AL88 458 aaPredicted RBP15.52■□□□□ 0.08
CCDC42-202ENST00000539522 POLR3DP05423 398 aaPredicted RBP15.52■□□□□ 0.08
CCDC42-202ENST00000539522 GUCY1A2P33402 732 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 TDO2P48775 406 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 CTDSPL2Q05D32 466 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 C8orf34Q49A92 452 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 C16orf86Q6ZW13 317 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 TTC6Q86TZ1 520 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 CCDC84Q86UT8 332 aaPredicted RBP15.52■□□□□ 0.08
CCDC42-202ENST00000539522 TBC1D10CQ8IV04 446 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 C2orf69Q8N8R5 385 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 WRNIP1Q96S55 665 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCDC42-202ENST00000539522 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCDC42-202ENST00000539522 HERC5Q9UII4 1024 aaKnown RBP15.52■□□□□ 0.08
CCDC42-202ENST00000539522 ANAPC4Q9UJX5 808 aa15.52■□□□□ 0.08
CCDC42-202ENST00000539522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.52■□□□□ 0.08
CCDC42-202ENST00000539522 MINDY4BA8MYZ0 360 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 SEC24BO95487 1268 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 FGRP09769 529 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 CDK8P49336 464 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 HUNKP57058 714 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 PPARAQ07869 468 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 NOL9Q5SY16 702 aaKnown RBP15.51■□□□□ 0.07
CCDC42-202ENST00000539522 STK11IPQ8N1F8 1099 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 ZIC5Q96T25 663 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 NAPBQ9H115 298 aa15.51■□□□□ 0.07
CCDC42-202ENST00000539522 PPP1R12BO60237 982 aaPredicted RBP15.5■□□□□ 0.07
CCDC42-202ENST00000539522 GDF11O95390 407 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 HLA-DOAP06340 250 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 NF2P35240 595 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 HAND2P61296 217 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 MAP3K9P80192 1104 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 DCAF15Q66K64 600 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 RASAL3Q86YV0 1011 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 DNAJC5GQ8N7S2 189 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 RUFY2Q8WXA3 655 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 BACH2Q9BYV9 841 aa15.5■□□□□ 0.07
CCDC42-202ENST00000539522 PRDM1O75626 825 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 CYP21A2P08686 494 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 AKR1B1P15121 316 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 RASA1P20936 1047 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 CAP2P40123 477 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 MFAP1P55081 439 aaKnown RBP15.49■□□□□ 0.07
CCDC42-202ENST00000539522 TTLL12Q14166 644 aaPredicted RBP15.49■□□□□ 0.07
CCDC42-202ENST00000539522 CYP4F22Q6NT55 531 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 STOX1Q6ZVD7 989 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 ARMC9Q7Z3E5 817 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 ANKRD13AQ8IZ07 590 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 HHIPL1Q96JK4 782 aa15.49■□□□□ 0.07
CCDC42-202ENST00000539522 NACAP1Q9BZK3 213 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms