RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	ADD2	P35612	726 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CAP2	P40123	477 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CTU1	Q7Z7A3	348 aa	Known RBP	14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ANKRD23	Q86SG2	305 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	TTC6	Q86TZ1	520 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	TICAM2	Q86XR7	235 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ZNF296	Q8WUU4	475 aa	Predicted RBP	14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	DNAJC2	Q99543	621 aa	Known RBP	14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ZFYVE28	Q9HCC9	887 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	SLC45A1	Q9Y2W3	748 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	MYH7	P12883	1935 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	MAGEB6P1	A0A0J9YX57	407 aa		14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	LRRFIP1	Q32MZ4	808 aa	Known RBP	14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	FASTKD5	Q7L8L6	764 aa	Known RBP	14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	CRNKL1	Q9BZJ0	848 aa	Known RBP	14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	AFG3L2	Q9Y4W6	797 aa		14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	NDUFB9	Q9Y6M9	179 aa		14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	MYH1	P12882	1939 aa		14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ZNF532	Q9HCE3	1301 aa		14.89	□□□□□ -0.03
CLTCL1-205	ENST00000538828	SIPA1L1	O43166	1804 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828		A0A0G2JLL6	359 aa	Predicted RBP	14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	SMARCA5	O60264	1052 aa	Predicted RBP	14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	GLRX3	O76003	335 aa	Known RBP	14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ZFY	P08048	801 aa	Predicted RBP	14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ASNS	P08243	561 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	USP5	P45974	858 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	DYNLL1	P63167	89 aa	Known RBP	14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	CRHR2	Q13324	411 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ARHGEF6	Q15052	776 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	PRRT2	Q7Z6L0	340 aa	Predicted RBP	14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	MAPKAPK5	Q8IW41	473 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	KBTBD3	Q8NAB2	608 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ERO1A	Q96HE7	468 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ATP8A2	Q9NTI2	1148 aa		14.88	□□□□□ -0.03
CLTCL1-205	ENST00000538828	PHIP	Q8WWQ0	1821 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	BTBD19	C9JJ37	291 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	TLR2	O60603	784 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	DGKZ	Q13574	1117 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	MOGS	Q13724	837 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	TAF1C	Q15572	869 aa	Predicted RBP	14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	FAM43A	Q8N2R8	423 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	MIGA1	Q8NAN2	632 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ABHD8	Q96I13	439 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	WDR18	Q9BV38	432 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	MCOLN1	Q9GZU1	580 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	RWDD1	Q9H446	243 aa	Predicted RBP	14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	PALD1	Q9ULE6	856 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ZHX2	Q9Y6X8	837 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	PTPRF	P10586	1907 aa		14.87	□□□□□ -0.03
CLTCL1-205	ENST00000538828	USP17L5	A8MUK1	530 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	SP3	Q02447	781 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	TATDN1	Q6P1N9	297 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	SMC5	Q8IY18	1101 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	PROCA1	Q8NCQ7	364 aa	Predicted RBP	14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	R3HDML	Q9H3Y0	253 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	AS3MT	Q9HBK9	375 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	SERPINB13	Q9UIV8	391 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	SALL3	Q9BXA9	1300 aa		14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	DDX60L	Q5H9U9	1706 aa	Known RBP	14.86	□□□□□ -0.03
CLTCL1-205	ENST00000538828	GNRH1	P01148	92 aa		14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	SH3D19	Q5HYK7	790 aa		14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ZNF280C	Q8ND82	737 aa		14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	EDC3	Q96F86	508 aa	Known RBP	14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	TRIM34	Q9BYJ4	488 aa		14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	DNAJC18	Q9H819	358 aa		14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	STAP2	Q9UGK3	403 aa		14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	ATAD5	Q96QE3	1844 aa		14.85	□□□□□ -0.03
CLTCL1-205	ENST00000538828	MX1	P20591	662 aa		14.84	□□□□□ -0.03
CLTCL1-205	ENST00000538828	GABPA	Q06546	454 aa		14.84	□□□□□ -0.03
CLTCL1-205	ENST00000538828	GIMAP6	Q6P9H5	292 aa		14.84	□□□□□ -0.03
CLTCL1-205	ENST00000538828	FBXO46	Q6PJ61	603 aa	Predicted RBP	14.84	□□□□□ -0.03
CLTCL1-205	ENST00000538828	PI4K2B	Q8TCG2	481 aa		14.84	□□□□□ -0.03
CLTCL1-205	ENST00000538828	PARK7	Q99497	189 aa	Known RBP	14.84	□□□□□ -0.03
CLTCL1-205	ENST00000538828	DCP1A	Q9NPI6	582 aa	Predicted RBP	14.84	□□□□□ -0.03
CLTCL1-205	ENST00000538828	C19orf81	C9J6K1	198 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	PDHX	O00330	501 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	ANKRD45	Q5TZF3	282 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	GPAT2	Q6NUI2	795 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	C17orf99	Q6UX52	265 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	APPBP2	Q92624	585 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	DDRGK1	Q96HY6	314 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	SWAP70	Q9UH65	585 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	ADGRA2	Q96PE1	1338 aa		14.83	□□□□□ -0.04
CLTCL1-205	ENST00000538828	NAV1	Q8NEY1	1877 aa		14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	FAM196B	A6NMK8	535 aa		14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	PABPC4	Q13310	644 aa	Known RBP eCLIP	14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	RRP1B	Q14684	758 aa	Known RBP	14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	LCORL	Q8N3X6	602 aa		14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	MCM9	Q9NXL9	1143 aa		14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	PNMA3	Q9UL41	463 aa		14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	AGTPBP1	Q9UPW5	1226 aa		14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	SUPT16H	Q9Y5B9	1047 aa	Known RBP	14.82	□□□□□ -0.04
CLTCL1-205	ENST00000538828	LOC285556	D6RIA3	1793 aa		14.81	□□□□□ -0.04
CLTCL1-205	ENST00000538828	RNF113A	O15541	343 aa	Known RBP	14.81	□□□□□ -0.04
CLTCL1-205	ENST00000538828	MBD4	O95243	580 aa		14.81	□□□□□ -0.04
CLTCL1-205	ENST00000538828	POLR3D	P05423	398 aa	Predicted RBP	14.81	□□□□□ -0.04
CLTCL1-205	ENST00000538828	SLURP2	P0DP57	97 aa		14.81	□□□□□ -0.04

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