RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 FLT1P17948 1338 aa18.26■□□□□ 0.51
RAB40B-202ENST00000538809 PDHXO00330 501 aa18.26■□□□□ 0.51
RAB40B-202ENST00000538809 TLR2O60603 784 aa18.26■□□□□ 0.51
RAB40B-202ENST00000538809 ECM2O94769 699 aaPredicted RBP18.26■□□□□ 0.51
RAB40B-202ENST00000538809 PLCG2P16885 1265 aa18.26■□□□□ 0.51
RAB40B-202ENST00000538809 ANKRD23Q86SG2 305 aa18.26■□□□□ 0.51
RAB40B-202ENST00000538809 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
RAB40B-202ENST00000538809 KIF1BPQ96EK5 621 aa18.26■□□□□ 0.51
RAB40B-202ENST00000538809 KIAA0100Q14667 2235 aaKnown RBP18.26■□□□□ 0.51
RAB40B-202ENST00000538809 PDE4DIPQ5VU43 2346 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 CTNND1O60716 968 aaKnown RBP18.25■□□□□ 0.51
RAB40B-202ENST00000538809 IGSF3O75054 1194 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 PPP4CP60510 307 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 GADL1Q6ZQY3 521 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
RAB40B-202ENST00000538809 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 MIGA1Q8NAN2 632 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 ARHGAP39Q9C0H5 1083 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 CPA4Q9UI42 421 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 PTPN22Q9Y2R2 807 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 DOCK3Q8IZD9 2030 aa18.25■□□□□ 0.51
RAB40B-202ENST00000538809 ADGRA2Q96PE1 1338 aa18.24■□□□□ 0.51
RAB40B-202ENST00000538809 CXCL11O14625 94 aa18.24■□□□□ 0.51
RAB40B-202ENST00000538809 TBC1D12O60347 775 aa18.24■□□□□ 0.51
RAB40B-202ENST00000538809 SLC4A8Q2Y0W8 1093 aa18.24■□□□□ 0.51
RAB40B-202ENST00000538809 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
RAB40B-202ENST00000538809 AFG3L2Q9Y4W6 797 aa18.24■□□□□ 0.51
RAB40B-202ENST00000538809 A0A0G2JLL6 359 aaPredicted RBP18.23■□□□□ 0.51
RAB40B-202ENST00000538809 TRIM75PA6NK02 468 aa18.23■□□□□ 0.51
RAB40B-202ENST00000538809 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
RAB40B-202ENST00000538809 RRP1BQ14684 758 aaKnown RBP18.23■□□□□ 0.51
RAB40B-202ENST00000538809 GPAT2Q6NUI2 795 aa18.23■□□□□ 0.51
RAB40B-202ENST00000538809 PRRT2Q7Z6L0 340 aaPredicted RBP18.23■□□□□ 0.51
RAB40B-202ENST00000538809 RAB11FIP3O75154 756 aa18.22■□□□□ 0.51
RAB40B-202ENST00000538809 LACTBP83111 547 aaPredicted RBP18.22■□□□□ 0.51
RAB40B-202ENST00000538809 MAP3K12Q12852 859 aa18.22■□□□□ 0.51
RAB40B-202ENST00000538809 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
RAB40B-202ENST00000538809 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
RAB40B-202ENST00000538809 CYP2C8P10632 490 aa18.21■□□□□ 0.51
RAB40B-202ENST00000538809 C17orf99Q6UX52 265 aa18.21■□□□□ 0.51
RAB40B-202ENST00000538809 PARK7Q99497 189 aaKnown RBP18.21■□□□□ 0.51
RAB40B-202ENST00000538809 DHX36Q9H2U1 1008 aaKnown RBP18.21■□□□□ 0.51
RAB40B-202ENST00000538809 DNAJC18Q9H819 358 aa18.21■□□□□ 0.51
RAB40B-202ENST00000538809 PI4KBQ9UBF8 816 aa18.21■□□□□ 0.51
RAB40B-202ENST00000538809 HERC5Q9UII4 1024 aaKnown RBP18.21■□□□□ 0.51
RAB40B-202ENST00000538809 PTCH2Q9Y6C5 1203 aa18.21■□□□□ 0.51
RAB40B-202ENST00000538809 GOLIM4O00461 696 aa18.2■□□□□ 0.5
RAB40B-202ENST00000538809 CTGFP29279 349 aa18.2■□□□□ 0.5
RAB40B-202ENST00000538809 CAP2P40123 477 aa18.2■□□□□ 0.5
RAB40B-202ENST00000538809 RRP1P56182 461 aaKnown RBP18.2■□□□□ 0.5
RAB40B-202ENST00000538809 KIF22Q14807 665 aa18.2■□□□□ 0.5
RAB40B-202ENST00000538809 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
RAB40B-202ENST00000538809 FASTKD5Q7L8L6 764 aaKnown RBP18.2■□□□□ 0.5
RAB40B-202ENST00000538809 CRACR2BQ8N4Y2 399 aaPredicted RBP18.2■□□□□ 0.5
RAB40B-202ENST00000538809 EDC3Q96F86 508 aaKnown RBP18.2■□□□□ 0.5
RAB40B-202ENST00000538809 USP5P45974 858 aa18.19■□□□□ 0.5
RAB40B-202ENST00000538809 ARHGEF6Q15052 776 aa18.19■□□□□ 0.5
RAB40B-202ENST00000538809 TTF1Q15361 905 aaPredicted RBP18.19■□□□□ 0.5
RAB40B-202ENST00000538809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.19■□□□□ 0.5
RAB40B-202ENST00000538809 TRIM34Q9BYJ4 488 aa18.19■□□□□ 0.5
RAB40B-202ENST00000538809 SMARCA5O60264 1052 aaPredicted RBP18.18■□□□□ 0.5
RAB40B-202ENST00000538809 GDF11O95390 407 aa18.18■□□□□ 0.5
RAB40B-202ENST00000538809 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
RAB40B-202ENST00000538809 PDE6AP16499 860 aa18.18■□□□□ 0.5
RAB40B-202ENST00000538809 SPP2Q13103 211 aa18.18■□□□□ 0.5
RAB40B-202ENST00000538809 TREML2Q5T2D2 321 aa18.18■□□□□ 0.5
RAB40B-202ENST00000538809 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
RAB40B-202ENST00000538809 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 BCRP11274 1271 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 PSMC4P43686 418 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 HMGCS2P54868 508 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 JAG1P78504 1218 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 SLC9C2Q5TAH2 1124 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 ZNF280CQ8ND82 737 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 ARMC5Q96C12 935 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 TRIM47Q96LD4 638 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 AGTPBP1Q9UPW5 1226 aa18.17■□□□□ 0.5
RAB40B-202ENST00000538809 BRCA2P51587 3418 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 MAGEB6P1A0A0J9YX57 407 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 SLC9C1Q4G0N8 1177 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 TMED8Q6PL24 325 aaPredicted RBP18.16■□□□□ 0.5
RAB40B-202ENST00000538809 CERS3Q8IU89 383 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 RIOK1Q9BRS2 568 aaKnown RBP18.16■□□□□ 0.5
RAB40B-202ENST00000538809 LRRCC1Q9C099 1032 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 DCTPP1Q9H773 170 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
RAB40B-202ENST00000538809 SLFNL1Q499Z3 407 aa18.15■□□□□ 0.5
RAB40B-202ENST00000538809 METTL16Q86W50 562 aaKnown RBP18.15■□□□□ 0.5
RAB40B-202ENST00000538809 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
RAB40B-202ENST00000538809 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
RAB40B-202ENST00000538809 SMCR8Q8TEV9 937 aaPredicted RBP18.15■□□□□ 0.5
RAB40B-202ENST00000538809 SH3TC2Q8TF17 1288 aa18.15■□□□□ 0.5
RAB40B-202ENST00000538809 AS3MTQ9HBK9 375 aa18.15■□□□□ 0.5
RAB40B-202ENST00000538809 PAG1Q9NWQ8 432 aa18.15■□□□□ 0.5
RAB40B-202ENST00000538809 SLC45A1Q9Y2W3 748 aa18.15■□□□□ 0.5
RAB40B-202ENST00000538809 PCDHB15Q9Y5E8 787 aa18.15■□□□□ 0.5
RAB40B-202ENST00000538809 PLXNB2O15031 1838 aa18.14■□□□□ 0.5
RAB40B-202ENST00000538809 TCRBV5S4A2TA0A5A2 114 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms