RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
USP3-203ENST00000538686 GOLGA6L10A6NI86 522 aa14□□□□□ -0.17
USP3-203ENST00000538686 TMEM232C9JQI7 657 aa14□□□□□ -0.17
USP3-203ENST00000538686 PDLIM1O00151 329 aa14□□□□□ -0.17
USP3-203ENST00000538686 DNAJC8O75937 253 aaPredicted RBP14□□□□□ -0.17
USP3-203ENST00000538686 NDUFA8P51970 172 aa14□□□□□ -0.17
USP3-203ENST00000538686 KRT32Q14532 448 aa14□□□□□ -0.17
USP3-203ENST00000538686 HHATQ5VTY9 493 aa14□□□□□ -0.17
USP3-203ENST00000538686 IRX2Q9BZI1 471 aaPredicted RBP14□□□□□ -0.17
USP3-203ENST00000538686 C19orf44Q9H6X5 657 aa14□□□□□ -0.17
USP3-203ENST00000538686 PCDHA7Q9UN72 937 aa14□□□□□ -0.17
USP3-203ENST00000538686 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
USP3-203ENST00000538686 DLG5Q8TDM6 1919 aa14□□□□□ -0.17
USP3-203ENST00000538686 NEDD4P46934 1319 aa14□□□□□ -0.17
USP3-203ENST00000538686 GOLGA8FQ08AF8 430 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 GOLGA8DPQ0D2H9 430 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 IFT88Q13099 833 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 RIPK1Q13546 671 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
USP3-203ENST00000538686 CCDC96Q2M329 555 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 LACTB2Q53H82 288 aaPredicted RBP13.99□□□□□ -0.17
USP3-203ENST00000538686 SPECC1Q5M775 1068 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 ARMC9Q7Z3E5 817 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 FAM81AQ8TBF8 368 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 AENQ8WTP8 325 aaKnown RBP13.99□□□□□ -0.17
USP3-203ENST00000538686 NSMCE1Q8WV22 266 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 MAP4K1Q92918 833 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 CUL5Q93034 780 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 CCDC51Q96ER9 411 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 PHACTR3Q96KR7 559 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 ANKRD27Q96NW4 1050 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 GGNBP2Q9H3C7 697 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 RIPOR2Q9Y4F9 1068 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 PPP1R37O75864 691 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 YEATS4O95619 227 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 GHRP10912 638 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 IBSPP21815 317 aaPredicted RBP13.99□□□□□ -0.17
USP3-203ENST00000538686 CD151P48509 253 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 PDCLQ13371 301 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 MYSM1Q5VVJ2 828 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 NLRP14Q86W24 1093 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 B4GALNT2Q8NHY0 566 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 MOV10L1Q9BXT6 1211 aaKnown RBP13.99□□□□□ -0.17
USP3-203ENST00000538686 PCDHGA4Q9Y5G9 962 aa13.99□□□□□ -0.17
USP3-203ENST00000538686 SLC27A2O14975 620 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 DTNBO60941 627 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 HSF2BPO75031 334 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
USP3-203ENST00000538686 SF3A1Q15459 793 aaKnown RBP13.98□□□□□ -0.17
USP3-203ENST00000538686 PTGISQ16647 500 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 CCDC57Q2TAC2 916 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 MTHFD1LQ6UB35 978 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 C1orf131Q8NDD1 294 aaKnown RBP13.98□□□□□ -0.17
USP3-203ENST00000538686 MIPOL1Q8TD10 442 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 CCT8L2Q96SF2 557 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 SNRKQ9NRH2 765 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 PAPOLBQ9NRJ5 636 aaKnown RBP13.98□□□□□ -0.17
USP3-203ENST00000538686 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 ARHGAP5Q13017 1502 aa13.98□□□□□ -0.17
USP3-203ENST00000538686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.98□□□□□ -0.17
USP3-203ENST00000538686 CD163L1Q9NR16 1453 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 PNMA6EA0A0J9YXQ4 647 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 A0A1B0GVL5 298 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 FYB1O15117 783 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 ATP6V1G2O95670 118 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 ANKRD20A8PQ5CZ79 823 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 THEMIS2Q5TEJ8 643 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 TRAPPC11Q7Z392 1133 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 ARHGAP22Q7Z5H3 698 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 EHBP1Q8NDI1 1231 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 MYCBPAPQ8TBZ2 947 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 RABEP2Q9H5N1 569 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 NOD2Q9HC29 1040 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.172e-22■■■■■ 279.5
USP3-203ENST00000538686 LMCD1Q9NZU5 365 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 ABLIM1O14639 778 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 JAK2O60674 1132 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 BLMHQ13867 455 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 HSP90AB4PQ58FF6 505 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 MSL1Q68DK7 614 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 TEX9Q8N6V9 391 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 PLEKHG4BQ96PX9 1271 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 TSC22D3Q99576 134 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 HAUS2Q9NVX0 235 aa13.97□□□□□ -0.17
USP3-203ENST00000538686 NOP53Q9NZM5 478 aaKnown RBP13.97□□□□□ -0.17
USP3-203ENST00000538686 KIF20BQ96Q89 1820 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 OVOS2A0A0G2JMS6 1433 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.17
USP3-203ENST00000538686 SOWAHDA6NJG2 315 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 SASH1O94885 1247 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 PYGLP06737 847 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 EMBQ6PCB8 327 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 PPFIBP1Q86W92 1011 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 NBPF15Q8N660 670 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 SSH3Q8TE77 659 aa13.96□□□□□ -0.17
USP3-203ENST00000538686 C14orf93Q9H972 538 aaKnown RBP13.96□□□□□ -0.17
USP3-203ENST00000538686 DACH1Q9UI36 760 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms