RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 IARSP41252 1262 aaKnown RBP16.47■□□□□ 0.23
ACTN1-205ENST00000538545 SPTY2D1Q68D10 685 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-205ENST00000538545 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-205ENST00000538545 ANAPC4Q9UJX5 808 aa16.47■□□□□ 0.23
ACTN1-205ENST00000538545 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
ACTN1-205ENST00000538545 PCDHAC2Q9Y5I4 1007 aa16.47■□□□□ 0.23
ACTN1-205ENST00000538545 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
ACTN1-205ENST00000538545 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-205ENST00000538545 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
ACTN1-205ENST00000538545 CLIC4Q9Y696 253 aa16.47■□□□□ 0.23
ACTN1-205ENST00000538545 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
ACTN1-205ENST00000538545 NASPP49321 788 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-205ENST00000538545 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
ACTN1-205ENST00000538545 RTN1Q16799 776 aa16.46■□□□□ 0.23
ACTN1-205ENST00000538545 RASGRP2Q7LDG7 609 aa16.46■□□□□ 0.23
ACTN1-205ENST00000538545 NR1I2O75469 434 aa16.46■□□□□ 0.23
ACTN1-205ENST00000538545 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
ACTN1-205ENST00000538545 ZSCAN16Q9H4T2 348 aaPredicted RBP16.46■□□□□ 0.23
ACTN1-205ENST00000538545 DACT1Q9NYF0 836 aa16.46■□□□□ 0.23
ACTN1-205ENST00000538545 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
ACTN1-205ENST00000538545 MROH7-TTC4A0A0A0MT08 1334 aa16.46■□□□□ 0.22
ACTN1-205ENST00000538545 GOLGA6L4A6NEF3 574 aa16.46■□□□□ 0.22
ACTN1-205ENST00000538545 PLEKHA8P1O95397 391 aa16.46■□□□□ 0.22
ACTN1-205ENST00000538545 KRT40Q6A162 431 aa16.46■□□□□ 0.22
ACTN1-205ENST00000538545 SYNE3Q6ZMZ3 975 aa16.46■□□□□ 0.22
ACTN1-205ENST00000538545 CKAP2LQ8IYA6 745 aa16.46■□□□□ 0.22
ACTN1-205ENST00000538545 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.22
ACTN1-205ENST00000538545 USP17L3A6NCW0 530 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 USP17L4A6NCW7 530 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 PDE6BP35913 854 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 PICALMQ13492 652 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 IFIT1BQ5T764 474 aaKnown RBP16.45■□□□□ 0.22
ACTN1-205ENST00000538545 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
ACTN1-205ENST00000538545 USP17L1Q7RTZ2 530 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 FANCBQ8NB91 859 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 SCAND2PQ9GZW5 306 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-205ENST00000538545 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 TSPY2A6NKD2 308 aa16.45■□□□□ 0.22
ACTN1-205ENST00000538545 ERCC4Q92889 916 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-205ENST00000538545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
ACTN1-205ENST00000538545 A0A087WWV3 80 aa16.44■□□□□ 0.22
ACTN1-205ENST00000538545 CCDC183Q5T5S1 534 aa16.44■□□□□ 0.22
ACTN1-205ENST00000538545 MYH15Q9Y2K3 1946 aa16.44■□□□□ 0.22
ACTN1-205ENST00000538545 LTBP1Q14766 1721 aa16.44■□□□□ 0.22
ACTN1-205ENST00000538545 KIF23Q02241 960 aaPredicted RBP16.44■□□□□ 0.22
ACTN1-205ENST00000538545 SHISA4Q96DD7 197 aa16.44■□□□□ 0.22
ACTN1-205ENST00000538545 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-205ENST00000538545 TFAP4Q01664 338 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 C12orf60Q5U649 245 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 TEX11Q8IYF3 940 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 FLAD1Q8NFF5 587 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 ADAMTSL1Q8N6G6 1762 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 G3V3G9 751 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 SSRP1Q08945 709 aaKnown RBP16.43■□□□□ 0.22
ACTN1-205ENST00000538545 DCAF8Q5TAQ9 597 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 NRXN2Q9P2S2 1712 aa16.43■□□□□ 0.22
ACTN1-205ENST00000538545 BAG3O95817 575 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 RHBDL3P58872 404 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 SYAP1Q96A49 352 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-205ENST00000538545 IL17RBQ9NRM6 502 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-205ENST00000538545 TTF2Q9UNY4 1162 aaKnown RBP16.42■□□□□ 0.22
ACTN1-205ENST00000538545 DAGLAQ9Y4D2 1042 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 MAST2Q6P0Q8 1798 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 H0YIN7 160 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 MARCKSP29966 332 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-205ENST00000538545 ME1P48163 572 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 CACNB3P54284 484 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 CSPP1Q1MSJ5 1256 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 CPLX2Q6PUV4 134 aaKnown RBP16.42■□□□□ 0.22
ACTN1-205ENST00000538545 CDK5RAP2Q96SN8 1893 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
ACTN1-205ENST00000538545 ELP1O95163 1332 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
ACTN1-205ENST00000538545 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 NR5A1Q13285 461 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 MYSM1Q5VVJ2 828 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 FGRP09769 529 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 IFNAR1P17181 557 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 TROAPQ12815 778 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 RCSD1Q6JBY9 416 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 KIAA0825Q8IV33 1275 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 CRACR2BQ8N4Y2 399 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-205ENST00000538545 OXER1Q8TDS5 423 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 MKNK2Q9HBH9 465 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 GPR75-ASB3A0A0A6YYF3 556 aa16.41■□□□□ 0.22
ACTN1-205ENST00000538545 FMNL1O95466 1100 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-205ENST00000538545 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
ACTN1-205ENST00000538545 ATP2B1P20020 1258 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms