RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PLCG2P16885 1265 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 STX2P32856 288 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 CTNNA1P35221 906 aaKnown RBP7.69□□□□□ -1.18
SORT1-209ENST00000538502 TSC1Q92574 1164 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 ATP2A3Q93084 1043 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 SPZ1Q9BXG8 430 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 HAUS4Q9H6D7 363 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 UGGT2Q9NYU1 1516 aa7.69□□□□□ -1.18
SORT1-209ENST00000538502 MGEA5O60502 916 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 MAGEA1P43355 309 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 MRPS9P82933 396 aaKnown RBP7.68□□□□□ -1.18
SORT1-209ENST00000538502 KRT71Q3SY84 523 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 SFMBT2Q5VUG0 894 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 CNOT10Q9H9A5 744 aaKnown RBP7.68□□□□□ -1.18
SORT1-209ENST00000538502 AGTPBP1Q9UPW5 1226 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 MAGEB6P1A0A0J9YX57 407 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 SLC27A2O14975 620 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 HSPA1LP34931 641 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 ATP2B3Q16720 1220 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 SLC4A8Q2Y0W8 1093 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 WDR44Q5JSH3 913 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 TSHZ3Q63HK5 1081 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 ANKRD13DQ6ZTN6 518 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 IFNL2Q8IZJ0 200 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 BCAS4Q8TDM0 211 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 FBXO41Q8TF61 875 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 EXOC7Q9UPT5 735 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 SNX14Q9Y5W7 946 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 ARHGEF11O15085 1522 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 RAPGEF1Q13905 1077 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 CSGALNACT2Q8N6G5 542 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 FAF1Q9UNN5 650 aaPredicted RBP7.68□□□□□ -1.18
SORT1-209ENST00000538502 PPP2R2CQ9Y2T4 447 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 EMILIN1Q9Y6C2 1016 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 SMIM24O75264 130 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 SUN1O94901 812 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 PDE4DQ08499 809 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 HAUS3Q68CZ6 603 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 NME9Q86XW9 330 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 PPP1R9AQ9ULJ8 1098 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.68□□□□□ -1.18
SORT1-209ENST00000538502 CCDC169A6NNP5 214 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 VGLL3A8MV65 326 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 B4DLN1 442 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 CRCPO75575 148 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 MRPL12P52815 198 aaKnown RBP7.68□□□□□ -1.18
SORT1-209ENST00000538502 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 RBM26Q5T8P6 1007 aaKnown RBP7.68□□□□□ -1.18
SORT1-209ENST00000538502 ADALQ6DHV7 355 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 MCTP2Q6DN12 878 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 CERS3Q8IU89 383 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 CCDC197Q8NCU1 140 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 LMNAP02545 664 aaKnown RBP7.68□□□□□ -1.18
SORT1-209ENST00000538502 CYP7A1P22680 504 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 EPSTI1Q96J88 318 aa7.68□□□□□ -1.18
SORT1-209ENST00000538502 OPHN1O60890 802 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 SEC24BO95487 1268 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 MAN1A1P33908 653 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 KRT9P35527 623 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 ANKRD20A4Q4UJ75 823 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 LRRC23Q53EV4 343 aaPredicted RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 ANKRD20A8PQ5CZ79 823 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 ANKRD20A2Q5SQ80 823 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 ANKRD20A1Q5TYW2 823 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 PPP4R1Q8TF05 950 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 DRC3Q9H069 523 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 VPS16Q9H269 839 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 FAM135BQ49AJ0 1406 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 ZBTB7BO15156 539 aaPredicted RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 BCRP11274 1271 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 RPGRQ92834 1020 aaKnown RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 RNF14Q9UBS8 474 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 NOS1P29475 1434 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 SPDYE3A6NKU9 549 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 TRAF5O00463 557 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 TXNDC9O14530 226 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 CEP104O60308 925 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 PFDN1O60925 122 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 ST5P78524 1137 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 MTX1Q13505 466 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 UBE3BQ7Z3V4 1068 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 PEX26Q7Z412 305 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 ANKLE2Q86XL3 938 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 LINS1Q8NG48 757 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 LZTS2Q9BRK4 669 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 VAT1LQ9HCJ6 419 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 PPANQ9NQ55 473 aaKnown RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 HAUS2Q9NVX0 235 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 AMFRQ9UKV5 643 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 VAMP4O75379 141 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 SEPT2Q15019 361 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 TRIM42Q8IWZ5 723 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 LRRC2Q9BYS8 371 aa7.67□□□□□ -1.18
SORT1-209ENST00000538502 IFIH1Q9BYX4 1025 aaKnown RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 TCOF1Q13428 1488 aaKnown RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 NUTM2BA6NNL0 878 aaPredicted RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 NUTM2EB1AL46 878 aaPredicted RBP7.67□□□□□ -1.18
SORT1-209ENST00000538502 MAGEA9P43362 315 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms