RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 RLFQ13129 1914 aa12.47□□□□□ -0.41
PRKAB1-204ENST00000538271 INPP5BP32019 993 aa12.46□□□□□ -0.41
PRKAB1-204ENST00000538271 PBX2P40425 430 aa12.46□□□□□ -0.41
PRKAB1-204ENST00000538271 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
PRKAB1-204ENST00000538271 ANKRD13CQ8N6S4 541 aa12.46□□□□□ -0.41
PRKAB1-204ENST00000538271 SMCR8Q8TEV9 937 aaPredicted RBP12.46□□□□□ -0.41
PRKAB1-204ENST00000538271 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
PRKAB1-204ENST00000538271 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
PRKAB1-204ENST00000538271 ZFHX4Q86UP3 3567 aa12.46□□□□□ -0.42
PRKAB1-204ENST00000538271 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
PRKAB1-204ENST00000538271 TRIM43BA6NCK2 446 aa12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 CCND3P30281 292 aaPredicted RBP12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 SKIV2LQ15477 1246 aaKnown RBP12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 SH3RF1Q7Z6J0 888 aa12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 MICALL1Q8N3F8 863 aa12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 TRIM43Q96BQ3 446 aaPredicted RBP12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 PBX4Q9BYU1 374 aa12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 PDLIM7Q9NR12 457 aa12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 CHD7Q9P2D1 2997 aa12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 ZFHX2Q9C0A1 2572 aaPredicted RBP12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 PRRC2BQ5JSZ5 2229 aaKnown RBP12.45□□□□□ -0.42
PRKAB1-204ENST00000538271 CXCL11O14625 94 aa12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 RGS20O76081 388 aa12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 FKBP1AP62942 108 aaKnown RBP12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 CACNB2Q08289 660 aaPredicted RBP12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 HERVK_113Q902F9 699 aa12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
PRKAB1-204ENST00000538271 GFRA3O60609 400 aa12.43□□□□□ -0.42
PRKAB1-204ENST00000538271 CYP2B6P20813 491 aa12.43□□□□□ -0.42
PRKAB1-204ENST00000538271 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
PRKAB1-204ENST00000538271 FAM110CQ1W6H9 321 aa12.43□□□□□ -0.42
PRKAB1-204ENST00000538271 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
PRKAB1-204ENST00000538271 ATRXP46100 2492 aa12.43□□□□□ -0.42
PRKAB1-204ENST00000538271 TPRP12270 2363 aaKnown RBP12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 GRXCR1A8MXD5 290 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 HSP90B1P14625 803 aaKnown RBP12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 DCAF15Q66K64 600 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 ANKS1AQ92625 1134 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 HOOK2Q96ED9 719 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 ZNF341Q9BYN7 854 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 COG5Q9UP83 839 aa12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 RPAP1Q9BWH6 1393 aaPredicted RBP12.42□□□□□ -0.42
PRKAB1-204ENST00000538271 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 PDE8AO60658 829 aa12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 SLC39A5Q6ZMH5 540 aa12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 MIGA2Q7L4E1 593 aa12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 SERPINA10Q9UK55 444 aa12.41□□□□□ -0.42
PRKAB1-204ENST00000538271 DNM1LO00429 736 aa12.4□□□□□ -0.42
PRKAB1-204ENST00000538271 ALADP13716 330 aa12.4□□□□□ -0.42
PRKAB1-204ENST00000538271 GADL1Q6ZQY3 521 aa12.4□□□□□ -0.42
PRKAB1-204ENST00000538271 ZSWIM6Q9HCJ5 1215 aa12.4□□□□□ -0.42
PRKAB1-204ENST00000538271 JAG2Q9Y219 1238 aa12.4□□□□□ -0.42
PRKAB1-204ENST00000538271 PTPRFP10586 1907 aa12.4□□□□□ -0.42
PRKAB1-204ENST00000538271 BRWD1Q9NSI6 2320 aa12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 XRCC5P13010 732 aaKnown RBP12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 CACNB3P54284 484 aa12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 SNX17Q15036 470 aa12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 RNF166Q96A37 237 aaPredicted RBP12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 ZNF112Q9UJU3 913 aa12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
PRKAB1-204ENST00000538271 RIF1Q5UIP0 2472 aaKnown RBP12.38□□□□□ -0.43
PRKAB1-204ENST00000538271 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
PRKAB1-204ENST00000538271 FPGSQ05932 587 aa12.38□□□□□ -0.43
PRKAB1-204ENST00000538271 NOL9Q5SY16 702 aaKnown RBP12.38□□□□□ -0.43
PRKAB1-204ENST00000538271 TRMT44Q8IYL2 757 aaKnown RBP12.38□□□□□ -0.43
PRKAB1-204ENST00000538271 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
PRKAB1-204ENST00000538271 TTF2Q9UNY4 1162 aaKnown RBP12.38□□□□□ -0.43
PRKAB1-204ENST00000538271 IL1R1P14778 569 aa12.37□□□□□ -0.43
PRKAB1-204ENST00000538271 GJD3Q8N144 294 aa12.37□□□□□ -0.43
PRKAB1-204ENST00000538271 PRSS33Q8NF86 280 aa12.37□□□□□ -0.43
PRKAB1-204ENST00000538271 LPAR1Q92633 364 aa12.37□□□□□ -0.43
PRKAB1-204ENST00000538271 GBF1Q92538 1859 aa12.37□□□□□ -0.43
PRKAB1-204ENST00000538271 DLG5Q8TDM6 1919 aa12.37□□□□□ -0.43
PRKAB1-204ENST00000538271 FAM186AA6NE01 2351 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 CRKP46108 304 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 PTPN5P54829 565 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 DSG2Q14126 1118 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 FAM83AQ86UY5 434 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 MSRAQ9UJ68 235 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 CACNA1HO95180 2353 aa12.36□□□□□ -0.43
PRKAB1-204ENST00000538271 A0A0G2JMZ2 1700 aa12.35□□□□□ -0.43
PRKAB1-204ENST00000538271 RAG1P15918 1043 aa12.35□□□□□ -0.43
PRKAB1-204ENST00000538271 KCNJ4P48050 445 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms