RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PLIN2Q99541 437 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 VAT1LQ9HCJ6 419 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 STX8Q9UNK0 236 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.81
UBE3B-208ENST00000538070 ADAMTS7Q9UKP4 1686 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 PKD1L3Q7Z443 1732 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 HOMER1Q86YM7 354 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 NOSTRINQ8IVI9 506 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 DYNLL2Q96FJ2 89 aa10.02□□□□□ -0.81
UBE3B-208ENST00000538070 PES1O00541 588 aaKnown RBP10.01□□□□□ -0.81
UBE3B-208ENST00000538070 TPM3P06753 285 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 USP17L8P0C7I0 530 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 CDC25AP30304 524 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 MECOMQ03112 1051 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 TPTE2Q6XPS3 522 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 AMIGO3Q86WK7 504 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 PLA2G4DQ86XP0 818 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 ZBTB9Q96C00 473 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 CPVLQ9H3G5 476 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 PRDM10Q9NQV6 1147 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 SERTAD1Q9UHV2 236 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 PARP4Q9UKK3 1724 aaKnown RBP10.01□□□□□ -0.81
UBE3B-208ENST00000538070 AXDND1Q5T1B0 1012 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-208ENST00000538070 CPLX3Q8WVH0 158 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 PCDHA5Q9Y5H7 936 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 GNAT2P19087 354 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 CMA1P23946 247 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 NTRK3Q16288 839 aa10.01□□□□□ -0.81
UBE3B-208ENST00000538070 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
UBE3B-208ENST00000538070 CDCA7Q9BWT1 371 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-208ENST00000538070 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-208ENST00000538070 CCDC196A0A1B0GTZ2 297 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 SPDYE4A6NLX3 237 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 RRP9O43818 475 aaKnown RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 NLRP5P59047 1200 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 ATL3Q6DD88 541 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 ENAHQ8N8S7 591 aaPredicted RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 RASGRP4Q8TDF6 673 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 WASF1Q92558 559 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 VWA3AA6NCI4 1184 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 TOM1O60784 492 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 UBASH3AP57075 661 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 MAPKAPK5Q8IW41 473 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 LRRC8AQ8IWT6 810 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 SMYD4Q8IYR2 804 aaPredicted RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 CRACR2BQ8N4Y2 399 aaPredicted RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 SLC44A5Q8NCS7 719 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 CTCFLQ8NI51 663 aaPredicted RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 GPKOWQ92917 476 aaPredicted RBP eCLIP10□□□□□ -0.817e-6■■■■■ 33.4
UBE3B-208ENST00000538070 AK7Q96M32 723 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 ZSCAN10Q96SZ4 725 aaPredicted RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 USP21Q9UK80 565 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 SPATA31A5Q5VU36 1347 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 SPATA31A7Q8IWB4 1347 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 ABCC12Q96J65 1359 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 FMNL1O95466 1100 aaPredicted RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 GOLGA8HP0CJ92 632 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 XBP1P17861 261 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 MCM7P33993 719 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 EVCP57679 992 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 RBM43Q6ZSC3 357 aaKnown RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 FAM196AQ6ZSG2 479 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
UBE3B-208ENST00000538070 EPSTI1Q96J88 318 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 UIMC1Q96RL1 719 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 FANCLQ9NW38 375 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 MAPK8IP1Q9UQF2 711 aa10□□□□□ -0.81
UBE3B-208ENST00000538070 A0A1W2PQ27 194 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 A0A1W2PQ64 194 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 A0A1W2PQD8 194 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 DEXIO95424 95 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 VEGFAP15692 232 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-208ENST00000538070 IFNAR1P17181 557 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 SFPQP23246 707 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBE3B-208ENST00000538070 NLRP12P59046 1061 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 FANCCQ00597 558 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 DHX8Q14562 1220 aaKnown RBP9.99□□□□□ -0.81
UBE3B-208ENST00000538070 PTPN14Q15678 1187 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 PIK3AP1Q6ZUJ8 805 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 CRNKL1Q9BZJ0 848 aaKnown RBP9.99□□□□□ -0.81
UBE3B-208ENST00000538070 BSDC1Q9NW68 430 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-208ENST00000538070 C6orf229H3BNL8 230 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 MMP1P03956 469 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 LIFRP42702 1097 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 NFIXQ14938 502 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 EARS2Q5JPH6 523 aaKnown RBP9.99□□□□□ -0.81
UBE3B-208ENST00000538070 MYRIPQ8NFW9 859 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 TGFBRAP1Q8WUH2 860 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 STAG1Q8WVM7 1258 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 DPF2Q92785 391 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 ZNF512BQ96KM6 892 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-208ENST00000538070 CSRNP2Q9H175 543 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 GLI3P10071 1580 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 EP400Q96L91 3159 aa9.99□□□□□ -0.81
UBE3B-208ENST00000538070 UBE4AQ14139 1066 aa9.98□□□□□ -0.81
UBE3B-208ENST00000538070 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms