RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 DZIP1Q86YF9 867 aaKnown RBP13.92□□□□□ -0.18
CLPB-208ENST00000538021 ZNF280CQ8ND82 737 aa13.92□□□□□ -0.18
CLPB-208ENST00000538021 CDX2Q99626 313 aaPredicted RBP13.92□□□□□ -0.18
CLPB-208ENST00000538021 NUDT12Q9BQG2 462 aa13.92□□□□□ -0.18
CLPB-208ENST00000538021 ASCC2Q9H1I8 757 aaPredicted RBP13.92□□□□□ -0.18
CLPB-208ENST00000538021 DDX4Q9NQI0 724 aaKnown RBP13.92□□□□□ -0.18
CLPB-208ENST00000538021 ZKSCAN1P17029 563 aaPredicted RBP13.91□□□□□ -0.18
CLPB-208ENST00000538021 CACNB2Q08289 660 aaPredicted RBP13.91□□□□□ -0.18
CLPB-208ENST00000538021 MAFAQ8NHW3 353 aaPredicted RBP13.91□□□□□ -0.18
CLPB-208ENST00000538021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLPB-208ENST00000538021 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
CLPB-208ENST00000538021 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 MYH2Q9UKX2 1941 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 PEX10O60683 326 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 CCND3P30281 292 aaPredicted RBP13.9□□□□□ -0.18
CLPB-208ENST00000538021 BTDP43251 543 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
CLPB-208ENST00000538021 PDE3AQ14432 1141 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 WDR63Q8IWG1 891 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 SOCS4Q8WXH5 440 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 SENP6Q9GZR1 1112 aaPredicted RBP13.9□□□□□ -0.18
CLPB-208ENST00000538021 OSBPL5Q9H0X9 879 aaPredicted RBP13.9□□□□□ -0.18
CLPB-208ENST00000538021 ABCF2Q9UG63 623 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 PLXNB2O15031 1838 aa13.9□□□□□ -0.18
CLPB-208ENST00000538021 GAKO14976 1311 aa13.9□□□□□ -0.19
CLPB-208ENST00000538021 COL2A1P02458 1487 aaPredicted RBP13.89□□□□□ -0.19
CLPB-208ENST00000538021 TBC1D12O60347 775 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
CLPB-208ENST00000538021 PHKA1P46020 1223 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 CCDC184Q52MB2 194 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 LHX8Q68G74 356 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
CLPB-208ENST00000538021 SLF2Q8IX21 1173 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 TRMT44Q8IYL2 757 aaKnown RBP13.89□□□□□ -0.19
CLPB-208ENST00000538021 ZGPATQ8N5A5 531 aaKnown RBP13.89□□□□□ -0.19
CLPB-208ENST00000538021 SEMA6BQ9H3T3 888 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 MORF4L1Q9UBU8 362 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
CLPB-208ENST00000538021 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 SEMA3EO15041 775 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 RFX5P48382 616 aaPredicted RBP13.88□□□□□ -0.19
CLPB-208ENST00000538021 ATN1P54259 1190 aaPredicted RBP13.88□□□□□ -0.19
CLPB-208ENST00000538021 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
CLPB-208ENST00000538021 GPRC5AQ8NFJ5 357 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 P2RX7Q99572 595 aaKnown RBP13.88□□□□□ -0.19
CLPB-208ENST00000538021 TBC1D2Q9BYX2 928 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 SIL1Q9H173 461 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 CEP126Q9P2H0 1117 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
CLPB-208ENST00000538021 RGS2P41220 211 aa13.87□□□□□ -0.19
CLPB-208ENST00000538021 CCL14Q16627 93 aa13.87□□□□□ -0.19
CLPB-208ENST00000538021 ATG9AQ7Z3C6 839 aa13.87□□□□□ -0.19
CLPB-208ENST00000538021 MYLIPQ8WY64 445 aa13.87□□□□□ -0.19
CLPB-208ENST00000538021 SYMPKQ92797 1274 aaKnown RBP13.87□□□□□ -0.19
CLPB-208ENST00000538021 TXNRD2Q9NNW7 524 aa13.87□□□□□ -0.19
CLPB-208ENST00000538021 TMOD4Q9NZQ9 345 aa13.87□□□□□ -0.19
CLPB-208ENST00000538021 COL9A1P20849 921 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 MAPK4P31152 587 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 CAP2P40123 477 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 HERVK_113P62684 666 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 MTMR2Q13614 643 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 RRP1BQ14684 758 aaKnown RBP13.86□□□□□ -0.19
CLPB-208ENST00000538021 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
CLPB-208ENST00000538021 USP44Q9H0E7 712 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 CWC22Q9HCG8 908 aaKnown RBP13.86□□□□□ -0.19
CLPB-208ENST00000538021 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
CLPB-208ENST00000538021 FOSL2P15408 326 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 ADORA1P30542 326 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 RHBDL3P58872 404 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 SHHQ15465 462 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 Q3C1V9 767 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
CLPB-208ENST00000538021 CCDC102BQ68D86 513 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 GPR142Q7Z601 462 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 APBA2Q99767 749 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 ATAD5Q96QE3 1844 aa13.85□□□□□ -0.19
CLPB-208ENST00000538021 GPR75-ASB3A0A0A6YYF3 556 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 CNGA1P29973 690 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
CLPB-208ENST00000538021 BACE1P56817 501 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 RTP1P59025 263 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 ERVK-9P63128 1117 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 ERVK-24P63145 666 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 RASGRF1Q13972 1273 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 C9orf50Q5SZB4 431 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 PLEKHH3Q7Z736 793 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 USP6NLQ92738 828 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 PORCNQ9H237 461 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 PRDM5Q9NQX1 630 aaPredicted RBP13.84□□□□□ -0.19
CLPB-208ENST00000538021 RBPJLQ9UBG7 517 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 ATP11BQ9Y2G3 1177 aa13.84□□□□□ -0.19
CLPB-208ENST00000538021 MECOMQ03112 1051 aa13.83□□□□□ -0.2
CLPB-208ENST00000538021 MORN1Q5T089 497 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms