RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 DNAJC2Q99543 621 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1A-209ENST00000536717 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.71■■□□□ 1.07
TNFRSF1A-209ENST00000536717 GOLIM4O00461 696 aa21.7■■□□□ 1.07
TNFRSF1A-209ENST00000536717 MOGSQ13724 837 aa21.7■■□□□ 1.07
TNFRSF1A-209ENST00000536717 DHX36Q9H2U1 1008 aaKnown RBP21.7■■□□□ 1.07
TNFRSF1A-209ENST00000536717 BOLA2Q9H3K6 86 aa21.7■■□□□ 1.07
TNFRSF1A-209ENST00000536717 ZCCHC17Q9NP64 241 aaKnown RBP21.7■■□□□ 1.07
TNFRSF1A-209ENST00000536717 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.7■■□□□ 1.07
TNFRSF1A-209ENST00000536717 NAV1Q8NEY1 1877 aa21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 DDX60LQ5H9U9 1706 aaKnown RBP21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 CCDC85CA6NKD9 419 aa21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 ATP5JP18859 108 aa21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 ZFYVE28Q9HCC9 887 aa21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PICK1Q9NRD5 415 aa21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PI4KBQ9UBF8 816 aa21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 ZHX2Q9Y6X8 837 aa21.7■■□□□ 1.06
TNFRSF1A-209ENST00000536717 ZSWIM8A7E2V4 1837 aa21.69■■□□□ 1.06
TNFRSF1A-209ENST00000536717 RRP1BQ14684 758 aaKnown RBP21.69■■□□□ 1.06
TNFRSF1A-209ENST00000536717 HERC5Q9UII4 1024 aaKnown RBP21.69■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PALD1Q9ULE6 856 aa21.69■■□□□ 1.06
TNFRSF1A-209ENST00000536717 AFG3L2Q9Y4W6 797 aa21.69■■□□□ 1.06
TNFRSF1A-209ENST00000536717 CXCL11O14625 94 aa21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PDE6AP16499 860 aa21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 CAP1Q01518 475 aa21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PKN2Q16513 984 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 SLC9C2Q5TAH2 1124 aa21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 CERS3Q8IU89 383 aa21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 RIOK1Q9BRS2 568 aaKnown RBP21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 DNAJC18Q9H819 358 aa21.68■■□□□ 1.06
TNFRSF1A-209ENST00000536717 SP3Q02447 781 aa21.67■■□□□ 1.06
TNFRSF1A-209ENST00000536717 ANKRD23Q86SG2 305 aa21.67■■□□□ 1.06
TNFRSF1A-209ENST00000536717 CCDC84Q86UT8 332 aaPredicted RBP21.67■■□□□ 1.06
TNFRSF1A-209ENST00000536717 METTL16Q86W50 562 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1A-209ENST00000536717 HAUS7Q99871 368 aa21.67■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PAG1Q9NWQ8 432 aa21.67■■□□□ 1.06
TNFRSF1A-209ENST00000536717 BAZ2AQ9UIF9 1905 aaKnown RBP21.67■■□□□ 1.06
TNFRSF1A-209ENST00000536717 TCRBV5S4A2TA0A5A2 114 aa21.66■■□□□ 1.06
TNFRSF1A-209ENST00000536717 TLR2O60603 784 aa21.66■■□□□ 1.06
TNFRSF1A-209ENST00000536717 CAP2P40123 477 aa21.66■■□□□ 1.06
TNFRSF1A-209ENST00000536717 CD99L2Q8TCZ2 262 aa21.66■■□□□ 1.06
TNFRSF1A-209ENST00000536717 SAP30BPQ9UHR5 308 aaKnown RBP21.66■■□□□ 1.06
TNFRSF1A-209ENST00000536717 ZNF532Q9HCE3 1301 aa21.66■■□□□ 1.06
TNFRSF1A-209ENST00000536717 A0A0G2JLL6 359 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 OTOP1Q7RTM1 612 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PRRT2Q7Z6L0 340 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 TRIM17Q9Y577 477 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 LOC285556D6RIA3 1793 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 PDHXO00330 501 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 USP5P45974 858 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 SLC4A8Q2Y0W8 1093 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 GPAT2Q6NUI2 795 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 FBXO46Q6PJ61 603 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 FOXP4Q8IVH2 680 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 HPS5Q9UPZ3 1129 aa21.65■■□□□ 1.06
TNFRSF1A-209ENST00000536717 MAGEB6P1A0A0J9YX57 407 aa21.64■■□□□ 1.05
TNFRSF1A-209ENST00000536717 MYH8P13535 1937 aa21.64■■□□□ 1.05
TNFRSF1A-209ENST00000536717 MGAMO43451 1857 aa21.63■■□□□ 1.05
TNFRSF1A-209ENST00000536717 TRIM75PA6NK02 468 aa21.63■■□□□ 1.05
TNFRSF1A-209ENST00000536717 SLFNL1Q499Z3 407 aa21.63■■□□□ 1.05
TNFRSF1A-209ENST00000536717 ECHDC1Q9NTX5 307 aa21.63■■□□□ 1.05
TNFRSF1A-209ENST00000536717 ADGRA2Q96PE1 1338 aa21.63■■□□□ 1.05
TNFRSF1A-209ENST00000536717 HLA-DOAP06340 250 aa21.62■■□□□ 1.05
TNFRSF1A-209ENST00000536717 ADD2P35612 726 aa21.62■■□□□ 1.05
TNFRSF1A-209ENST00000536717 CRACR2BQ8N4Y2 399 aaPredicted RBP21.62■■□□□ 1.05
TNFRSF1A-209ENST00000536717 CHGBP05060 677 aa21.61■■□□□ 1.05
TNFRSF1A-209ENST00000536717 JAG1P78504 1218 aa21.61■■□□□ 1.05
TNFRSF1A-209ENST00000536717 C17orf99Q6UX52 265 aa21.61■■□□□ 1.05
TNFRSF1A-209ENST00000536717 FASTKD5Q7L8L6 764 aaKnown RBP21.61■■□□□ 1.05
TNFRSF1A-209ENST00000536717 DOCK3Q8IZD9 2030 aa21.61■■□□□ 1.05
TNFRSF1A-209ENST00000536717 SHROOM1Q2M3G4 852 aaPredicted RBP21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 TSHZ3Q63HK5 1081 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 GADL1Q6ZQY3 521 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 LCORLQ8N3X6 602 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 EFCC1Q9HA90 598 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 KIAA0100Q14667 2235 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 BRCA2P51587 3418 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 SPP2Q13103 211 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 ZNF280CQ8ND82 737 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 TBC1D2Q9BYX2 928 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 CRNKL1Q9BZJ0 848 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 CPA4Q9UI42 421 aa21.6■■□□□ 1.05
TNFRSF1A-209ENST00000536717 USP17L5A8MUK1 530 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 GDF11O95390 407 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 ASNSP08243 561 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 CYP2C8P10632 490 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 SDR42E1Q8WUS8 393 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 PARK7Q99497 189 aaKnown RBP21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 TRIM34Q9BYJ4 488 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 EHD4Q9H223 541 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 SERPINB13Q9UIV8 391 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 PTPN22Q9Y2R2 807 aa21.59■■□□□ 1.05
TNFRSF1A-209ENST00000536717 RGS19P49795 217 aa21.58■■□□□ 1.04
TNFRSF1A-209ENST00000536717 PLCD1P51178 756 aa21.58■■□□□ 1.04
TNFRSF1A-209ENST00000536717 LACTBP83111 547 aaPredicted RBP21.58■■□□□ 1.04
TNFRSF1A-209ENST00000536717 HDAC1Q13547 482 aaPredicted RBP21.58■■□□□ 1.04
TNFRSF1A-209ENST00000536717 UBE3CQ15386 1083 aa21.58■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ARHGAP39Q9C0H5 1083 aa21.58■■□□□ 1.04
TNFRSF1A-209ENST00000536717 ARMT1Q9H993 441 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms