RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 OTUD7AQ8TE49 926 aaPredicted RBP21.79■■□□□ 1.08
CCDC61-201ENST00000536603 DDX4Q9NQI0 724 aaKnown RBP21.79■■□□□ 1.08
CCDC61-201ENST00000536603 AK9Q5TCS8 1911 aa21.78■■□□□ 1.08
CCDC61-201ENST00000536603 ENTPD3O75355 529 aa21.78■■□□□ 1.08
CCDC61-201ENST00000536603 MAP4K4O95819 1239 aaPredicted RBP21.78■■□□□ 1.08
CCDC61-201ENST00000536603 NEFLP07196 543 aa21.78■■□□□ 1.08
CCDC61-201ENST00000536603 PPP4CP60510 307 aa21.78■■□□□ 1.08
CCDC61-201ENST00000536603 MIGA2Q7L4E1 593 aa21.78■■□□□ 1.08
CCDC61-201ENST00000536603 SH3RF3Q8TEJ3 882 aaPredicted RBP21.78■■□□□ 1.08
CCDC61-201ENST00000536603 SH3TC2Q8TF17 1288 aa21.78■■□□□ 1.08
CCDC61-201ENST00000536603 ZNF341Q9BYN7 854 aa21.78■■□□□ 1.08
CCDC61-201ENST00000536603 ZCCHC17Q9NP64 241 aaKnown RBP21.78■■□□□ 1.08
CCDC61-201ENST00000536603 RPAP1Q9BWH6 1393 aaPredicted RBP21.77■■□□□ 1.08
CCDC61-201ENST00000536603 MAST2Q6P0Q8 1798 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 LACTBP83111 547 aaPredicted RBP21.77■■□□□ 1.08
CCDC61-201ENST00000536603 PPIL2Q13356 520 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 SLC9C2Q5TAH2 1124 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 B4GALNT3Q6L9W6 998 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 SMC5Q8IY18 1101 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 TEX11Q8IYF3 940 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 ARHGAP39Q9C0H5 1083 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 KIAA0100Q14667 2235 aaKnown RBP21.77■■□□□ 1.08
CCDC61-201ENST00000536603 ZSWIM8A7E2V4 1837 aa21.77■■□□□ 1.08
CCDC61-201ENST00000536603 CENPFP49454 3210 aa21.76■■□□□ 1.07
CCDC61-201ENST00000536603 RFX7Q2KHR2 1363 aa21.76■■□□□ 1.07
CCDC61-201ENST00000536603 PDE6AP16499 860 aa21.76■■□□□ 1.07
CCDC61-201ENST00000536603 PLCG2P16885 1265 aa21.76■■□□□ 1.07
CCDC61-201ENST00000536603 DYNLL1P63167 89 aaKnown RBP21.76■■□□□ 1.07
CCDC61-201ENST00000536603 ZSCAN29Q8IWY8 852 aaPredicted RBP21.76■■□□□ 1.07
CCDC61-201ENST00000536603 MIGA1Q8NAN2 632 aa21.76■■□□□ 1.07
CCDC61-201ENST00000536603 TTC41PQ6P2S7 1318 aa21.76■■□□□ 1.07
CCDC61-201ENST00000536603 DOCK2Q92608 1830 aa21.76■■□□□ 1.07
CCDC61-201ENST00000536603 GNRH1P01148 92 aa21.75■■□□□ 1.07
CCDC61-201ENST00000536603 TMED8Q6PL24 325 aaPredicted RBP21.75■■□□□ 1.07
CCDC61-201ENST00000536603 SH3BP5LQ7L8J4 393 aa21.75■■□□□ 1.07
CCDC61-201ENST00000536603 DDTLA6NHG4 134 aaPredicted RBP21.74■■□□□ 1.07
CCDC61-201ENST00000536603 NPM3O75607 178 aaKnown RBP21.74■■□□□ 1.07
CCDC61-201ENST00000536603 MX1P20591 662 aa21.74■■□□□ 1.07
CCDC61-201ENST00000536603 PPATQ06203 517 aa21.74■■□□□ 1.07
CCDC61-201ENST00000536603 TGFBRAP1Q8WUH2 860 aa21.74■■□□□ 1.07
CCDC61-201ENST00000536603 ZNF532Q9HCE3 1301 aa21.74■■□□□ 1.07
CCDC61-201ENST00000536603 ERC2O15083 957 aa21.73■■□□□ 1.07
CCDC61-201ENST00000536603 INPP5BP32019 993 aa21.73■■□□□ 1.07
CCDC61-201ENST00000536603 PRMT2P55345 433 aa21.73■■□□□ 1.07
CCDC61-201ENST00000536603 LNPKQ9C0E8 428 aa21.73■■□□□ 1.07
CCDC61-201ENST00000536603 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.73■■□□□ 1.071e-6■■■□□ 15.4
CCDC61-201ENST00000536603 CPA4Q9UI42 421 aa21.73■■□□□ 1.07
CCDC61-201ENST00000536603 PI4K2BQ8TCG2 481 aa21.72■■□□□ 1.07
CCDC61-201ENST00000536603 OSBPL5Q9H0X9 879 aaPredicted RBP21.72■■□□□ 1.07
CCDC61-201ENST00000536603 SALL3Q9BXA9 1300 aa21.72■■□□□ 1.07
CCDC61-201ENST00000536603 MKI67P46013 3256 aaKnown RBP21.72■■□□□ 1.07
CCDC61-201ENST00000536603 MAGEB6P1A0A0J9YX57 407 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 TCRBV5S4A2TA0A5A2 114 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 PDHXO00330 501 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 GLRX3O76003 335 aaKnown RBP21.71■■□□□ 1.07
CCDC61-201ENST00000536603 FMNL1O95466 1100 aaPredicted RBP21.71■■□□□ 1.07
CCDC61-201ENST00000536603 HOXD10P28358 340 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 ADD2P35612 726 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 PSMC4P43686 418 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 NUCB1Q02818 461 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 SLFNL1Q499Z3 407 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 ANKRD23Q86SG2 305 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 CHD1LQ86WJ1 897 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 CERS3Q8IU89 383 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 MAPKAPK5Q8IW41 473 aa21.71■■□□□ 1.07
CCDC61-201ENST00000536603 COLQQ9Y215 455 aaPredicted RBP21.71■■□□□ 1.07
CCDC61-201ENST00000536603 C17orf99Q6UX52 265 aa21.7■■□□□ 1.06
CCDC61-201ENST00000536603 RAET1EQ8TD07 263 aa21.7■■□□□ 1.06
CCDC61-201ENST00000536603 RIOK1Q9BRS2 568 aaKnown RBP21.7■■□□□ 1.06
CCDC61-201ENST00000536603 CHGBP05060 677 aa21.69■■□□□ 1.06
CCDC61-201ENST00000536603 SLURP2P0DP57 97 aa21.69■■□□□ 1.06
CCDC61-201ENST00000536603 ZSCAN25Q6NSZ9 544 aa21.69■■□□□ 1.06
CCDC61-201ENST00000536603 KBTBD3Q8NAB2 608 aa21.69■■□□□ 1.06
CCDC61-201ENST00000536603 BIN2Q9UBW5 565 aaPredicted RBP21.69■■□□□ 1.06
CCDC61-201ENST00000536603 FLT1P17948 1338 aa21.69■■□□□ 1.06
CCDC61-201ENST00000536603 USP5P45974 858 aa21.68■■□□□ 1.06
CCDC61-201ENST00000536603 FXR1P51114 621 aaKnown RBP eCLIP21.68■■□□□ 1.06
CCDC61-201ENST00000536603 PDE1AP54750 535 aa21.68■■□□□ 1.06
CCDC61-201ENST00000536603 UBE3CQ15386 1083 aa21.68■■□□□ 1.06
CCDC61-201ENST00000536603 STAP2Q9UGK3 403 aa21.68■■□□□ 1.06
CCDC61-201ENST00000536603 SRRDQ9UH36 339 aa21.68■■□□□ 1.06
CCDC61-201ENST00000536603 ZNF112Q9UJU3 913 aa21.68■■□□□ 1.06
CCDC61-201ENST00000536603 ATRNL1Q5VV63 1379 aa21.68■■□□□ 1.06
CCDC61-201ENST00000536603 H0YGN5 161 aa21.67■■□□□ 1.06
CCDC61-201ENST00000536603 OSBPP22059 807 aa21.67■■□□□ 1.06
CCDC61-201ENST00000536603 MAP3K10Q02779 954 aa21.67■■□□□ 1.06
CCDC61-201ENST00000536603 DPF3Q92784 378 aa21.67■■□□□ 1.06
CCDC61-201ENST00000536603 TRIM47Q96LD4 638 aa21.67■■□□□ 1.06
CCDC61-201ENST00000536603 DHX36Q9H2U1 1008 aaKnown RBP21.67■■□□□ 1.06
CCDC61-201ENST00000536603 GRK4P32298 578 aa21.66■■□□□ 1.06
CCDC61-201ENST00000536603 MTFR1Q15390 333 aa21.66■■□□□ 1.06
CCDC61-201ENST00000536603 LCORLQ8N3X6 602 aa21.66■■□□□ 1.06
CCDC61-201ENST00000536603 ARMT1Q9H993 441 aa21.66■■□□□ 1.06
CCDC61-201ENST00000536603 SAP30BPQ9UHR5 308 aaKnown RBP21.66■■□□□ 1.06
CCDC61-201ENST00000536603 PALD1Q9ULE6 856 aa21.66■■□□□ 1.06
CCDC61-201ENST00000536603 KCNH4Q9UQ05 1017 aa21.66■■□□□ 1.06
CCDC61-201ENST00000536603 COL2A1P02458 1487 aaPredicted RBP21.65■■□□□ 1.06
CCDC61-201ENST00000536603 MYPNQ86TC9 1320 aa21.65■■□□□ 1.06
CCDC61-201ENST00000536603 PHF20L1A8MW92 1017 aa21.65■■□□□ 1.06
CCDC61-201ENST00000536603 TBC1D12O60347 775 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms