RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CLASRPQ8N2M8 674 aaKnown RBP17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 MIGA1Q8NAN2 632 aa17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 CHMP4BQ9H444 224 aaKnown RBP17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 DOCK1Q14185 1865 aa17.43■□□□□ 0.38
RTN3P1-201ENST00000536295 CYP2C8P10632 490 aa17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 C17orf99Q6UX52 265 aa17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 FASTKD5Q7L8L6 764 aaKnown RBP17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 PARK7Q99497 189 aaKnown RBP17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 PTCH2Q9Y6C5 1203 aa17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 FLT1P17948 1338 aa17.42■□□□□ 0.38
RTN3P1-201ENST00000536295 IFIT2P09913 472 aaKnown RBP17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 RRP1BQ14684 758 aaKnown RBP17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 DHX36Q9H2U1 1008 aaKnown RBP17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 PI4KBQ9UBF8 816 aa17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 HERC5Q9UII4 1024 aaKnown RBP17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 PALD1Q9ULE6 856 aa17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 ZSWIM8A7E2V4 1837 aa17.41■□□□□ 0.38
RTN3P1-201ENST00000536295 IGSF3O75054 1194 aa17.4■□□□□ 0.38
RTN3P1-201ENST00000536295 CAP2P40123 477 aa17.4■□□□□ 0.38
RTN3P1-201ENST00000536295 CRACR2BQ8N4Y2 399 aaPredicted RBP17.4■□□□□ 0.38
RTN3P1-201ENST00000536295 TRIM34Q9BYJ4 488 aa17.4■□□□□ 0.38
RTN3P1-201ENST00000536295 ADGRA2Q96PE1 1338 aa17.4■□□□□ 0.38
RTN3P1-201ENST00000536295 RAB11FIP3O75154 756 aa17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 PSMC4P43686 418 aa17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 USP5P45974 858 aa17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 SPP2Q13103 211 aa17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 DNAJC2Q99543 621 aaKnown RBP17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 HTTP42858 3142 aa17.39■□□□□ 0.37
RTN3P1-201ENST00000536295 PHIPQ8WWQ0 1821 aa17.38■□□□□ 0.37
RTN3P1-201ENST00000536295 POTEFA5A3E0 1075 aa17.38■□□□□ 0.37
RTN3P1-201ENST00000536295 FMNL1O95466 1100 aaPredicted RBP17.38■□□□□ 0.37
RTN3P1-201ENST00000536295 MYCP01106 439 aaPredicted RBP17.38■□□□□ 0.37
RTN3P1-201ENST00000536295 CTGFP29279 349 aa17.38■□□□□ 0.37
RTN3P1-201ENST00000536295 ARMC5Q96C12 935 aa17.38■□□□□ 0.37
RTN3P1-201ENST00000536295 CDK5RAP2Q96SN8 1893 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 USP17L5A8MUK1 530 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 GOLIM4O00461 696 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 HLA-DOAP06340 250 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 TTF1Q15361 905 aaPredicted RBP17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 TREML2Q5T2D2 321 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 ZNF280CQ8ND82 737 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 SMCR8Q8TEV9 937 aaPredicted RBP17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 DNAJC18Q9H819 358 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
RTN3P1-201ENST00000536295 GDF11O95390 407 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 GNRH1P01148 92 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 BCRP11274 1271 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 HMGCS2P54868 508 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 SLC9C2Q5TAH2 1124 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 NBPF11Q86T75 865 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 CERS3Q8IU89 383 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 EDC3Q96F86 508 aaKnown RBP17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 ZNF333Q96JL9 665 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 SLC45A1Q9Y2W3 748 aa17.36■□□□□ 0.37
RTN3P1-201ENST00000536295 FOCADQ5VW36 1801 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 ATAD5Q96QE3 1844 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 PTPRFP10586 1907 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 PDE6AP16499 860 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 OSBPP22059 807 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 JAG1P78504 1218 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 SHROOM1Q2M3G4 852 aaPredicted RBP17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 TBC1D2Q9BYX2 928 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 BOLA2Q9H3K6 86 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 AS3MTQ9HBK9 375 aa17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 TNRC18O15417 2968 aaPredicted RBP17.35■□□□□ 0.37
RTN3P1-201ENST00000536295 MAGEB6P1A0A0J9YX57 407 aa17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 SMARCA5O60264 1052 aaPredicted RBP17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 ASNSP08243 561 aa17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 HOXD10P28358 340 aa17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 PRMT2P55345 433 aa17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 FCGRTP55899 365 aa17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 METTL16Q86W50 562 aaKnown RBP17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 PROCA1Q8NCQ7 364 aaPredicted RBP17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 TMEM106CQ9BVX2 250 aa17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 SRRDQ9UH36 339 aa17.34■□□□□ 0.37
RTN3P1-201ENST00000536295 MYPNQ86TC9 1320 aa17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 ZNF532Q9HCE3 1301 aa17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 EN2P19622 333 aaPredicted RBP17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 MTMR2Q13614 643 aa17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 ANKRD13CQ8N6S4 541 aa17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 RAET1EQ8TD07 263 aa17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 RIOK1Q9BRS2 568 aaKnown RBP17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 PNMA3Q9UL41 463 aa17.33■□□□□ 0.36
RTN3P1-201ENST00000536295 CENPFP49454 3210 aa17.32■□□□□ 0.36
RTN3P1-201ENST00000536295 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
RTN3P1-201ENST00000536295 ZBTB21Q9ULJ3 1066 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms