RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 GOLGA6L6A8MZA4 724 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 SNRPA1P09661 255 aaKnown RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 RBM10P98175 930 aaKnown RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 FOXK2Q01167 660 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 AIMP1Q12904 312 aaKnown RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 ELOAQ14241 798 aaKnown RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 MAP7D1Q3KQU3 841 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 ATL3Q6DD88 541 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 COPS6Q7L5N1 327 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 KRT28Q7Z3Y7 464 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 DEPDC4Q8N2C3 294 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 PHTF2Q8N3S3 785 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 TDRD7Q8NHU6 1098 aaKnown RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 GTF3C6Q969F1 213 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 PGBD1Q96JS3 809 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 ZNF830Q96NB3 372 aaPredicted RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 NEK1Q96PY6 1258 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 MYD88Q99836 296 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 AGXT2Q9BYV1 514 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 KCNF1Q9H3M0 494 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 ZSCAN16Q9H4T2 348 aaPredicted RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 GPR108Q9NPR9 543 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 DBNLQ9UJU6 430 aaKnown RBP6.74□□□□□ -1.33
VPS33A-203ENST00000536212 ZNF609O15014 1411 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 KIF1AQ12756 1690 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 SH3TC1Q8TE82 1336 aa6.74□□□□□ -1.33
VPS33A-203ENST00000536212 C1orf167Q5SNV9 1468 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 PALLDQ8WX93 1383 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 PFKFB2O60825 505 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 CAVIN2O95810 425 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 TATP17735 454 aaPredicted RBP6.73□□□□□ -1.33
VPS33A-203ENST00000536212 CDC25BP30305 580 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 ADD1P35611 737 aaKnown RBP6.73□□□□□ -1.33
VPS33A-203ENST00000536212 TFCP2Q12800 502 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 SLC39A6Q13433 755 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 NCOA4Q13772 614 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 ERFEQ4G0M1 354 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 MCMDC2Q4G0Z9 681 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 NAA16Q6N069 864 aaPredicted RBP6.73□□□□□ -1.33
VPS33A-203ENST00000536212 PLA2G4DQ86XP0 818 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 FBXL16Q8N461 479 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 KBTBD3Q8NAB2 608 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 PLBD2Q8NHP8 589 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 RAPGEF4Q8WZA2 1011 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 FOXJ1Q92949 421 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
VPS33A-203ENST00000536212 DCAF5Q96JK2 942 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 SPATA32Q96LK8 384 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 CNTNAP3BQ96NU0 1288 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 DSCC1Q9BVC3 393 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 CNTNAP3Q9BZ76 1288 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 TNMDQ9H2S6 317 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 CBX8Q9HC52 389 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 DACT1Q9NYF0 836 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 FAM13BQ9NYF5 915 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 RCOR1Q9UKL0 485 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 PYCARDQ9ULZ3 195 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 USP16Q9Y5T5 823 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 C5P01031 1676 aa6.73□□□□□ -1.33
VPS33A-203ENST00000536212 SCN11AQ9UI33 1791 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 ALS2Q96Q42 1657 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 ATP5J2-PTCD1G3V325 749 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 H7C1W4 665 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 CTAGE5O15320 804 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 JAK2O60674 1132 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 ZNF75DP51815 510 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 FOXO4P98177 505 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 EXOSC10Q01780 885 aaKnown RBP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 EML3Q32P44 896 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 ZMYM1Q5SVZ6 1142 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 ZNF385CQ66K41 422 aaPredicted RBP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 FAM173BQ6P4H8 233 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 STOX1Q6ZVD7 989 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 DHX32Q7L7V1 743 aaKnown RBP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 IFNL2Q8IZJ0 200 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 GPR161Q8N6U8 529 aaKnown RBP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 KLHDC4Q8TBB5 520 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 BRF1Q92994 677 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 CHMP4CQ96CF2 233 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 EDC3Q96F86 508 aaKnown RBP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 TCEANC2Q96MN5 208 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 FMNL2Q96PY5 1086 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 DBNDD2Q9BQY9 259 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 SIL1Q9H173 461 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 HELLSQ9NRZ9 838 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 MKRN1Q9UHC7 482 aaKnown RBP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 NOVA2Q9UNW9 492 aaKnown RBP6.72□□□□□ -1.33
VPS33A-203ENST00000536212 GLI3P10071 1580 aa6.72□□□□□ -1.33
VPS33A-203ENST00000536212 MEGF6O75095 1541 aa6.71□□□□□ -1.33
VPS33A-203ENST00000536212 UNCXA6NJT0 531 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 TMEM88BA6NKF7 163 aa6.71□□□□□ -1.34
VPS33A-203ENST00000536212 FAM196BA6NMK8 535 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms