RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TOMM22Q9NS69 142 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 PCDHA5Q9Y5H7 936 aa18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 COL14A1Q05707 1796 aaKnown RBP18.44■□□□□ 0.54
CHMP1A-202ENST00000535997 TIAM2Q8IVF5 1701 aa18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 ATP1A3P13637 1013 aa18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 PTPREP23469 700 aa18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 MDM2Q00987 491 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 STK11IPQ8N1F8 1099 aa18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 FANCBQ8NB91 859 aa18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 CDCA7Q9BWT1 371 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 CAMTA2O94983 1202 aa18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 ZNF579Q8NAF0 562 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 NOL10Q9BSC4 688 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 CGNQ9P2M7 1197 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-202ENST00000535997 SERPINC1P01008 464 aa18.42■□□□□ 0.54
CHMP1A-202ENST00000535997 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
CHMP1A-202ENST00000535997 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
CHMP1A-202ENST00000535997 ECM29Q5VYK3 1845 aa18.42■□□□□ 0.54
CHMP1A-202ENST00000535997 CHRNDQ07001 517 aa18.42■□□□□ 0.54
CHMP1A-202ENST00000535997 ANAPC4Q9UJX5 808 aa18.42■□□□□ 0.54
CHMP1A-202ENST00000535997 KCNJ14Q9UNX9 436 aa18.42■□□□□ 0.54
CHMP1A-202ENST00000535997 CCP110O43303 1012 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 PPARAQ07869 468 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 NT5DC1Q5TFE4 455 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 ZNF654Q8IZM8 581 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 MIGA1Q8NAN2 632 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 PPP1R13BQ96KQ4 1090 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 UBAC1Q9BSL1 405 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 FBXO2Q9UK22 296 aaPredicted RBP18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 CEP131Q9UPN4 1083 aa18.41■□□□□ 0.54
CHMP1A-202ENST00000535997 NTSR2O95665 410 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 CDC5LQ99459 802 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 NIP7Q9Y221 180 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 PLCH1Q4KWH8 1693 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 CYP7A1P22680 504 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 CBX1P83916 185 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 CFAP100Q494V2 611 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 KANK3Q6NY19 840 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 ESR2Q92731 530 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 ERO1AQ96HE7 468 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 FANCLQ9NW38 375 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 ZNF215Q9UL58 517 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 SRPRBQ9Y5M8 271 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 BCORQ6W2J9 1755 aa18.4■□□□□ 0.54
CHMP1A-202ENST00000535997 LOC102724428A0A0B4J2F2 783 aa18.39■□□□□ 0.54
CHMP1A-202ENST00000535997 SIK1P57059 783 aa18.39■□□□□ 0.54
CHMP1A-202ENST00000535997 CCDC82Q8N4S0 544 aa18.39■□□□□ 0.54
CHMP1A-202ENST00000535997 RNF26Q9BY78 433 aaPredicted RBP18.39■□□□□ 0.54
CHMP1A-202ENST00000535997 TMX1Q9H3N1 280 aa18.39■□□□□ 0.54
CHMP1A-202ENST00000535997 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.54
CHMP1A-202ENST00000535997 BMP6P22004 513 aa18.39■□□□□ 0.53
CHMP1A-202ENST00000535997 SARSP49591 514 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-202ENST00000535997 NAA30Q147X3 362 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-202ENST00000535997 POSTNQ15063 836 aa18.39■□□□□ 0.53
CHMP1A-202ENST00000535997 VSTM4Q8IW00 320 aa18.39■□□□□ 0.53
CHMP1A-202ENST00000535997 MLKLQ8NB16 471 aa18.39■□□□□ 0.53
CHMP1A-202ENST00000535997 MORC2Q9Y6X9 1032 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-202ENST00000535997 ZNF804BA4D1E1 1349 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 POLR2DO15514 142 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 SLU7O95391 586 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 SEC23AQ15436 765 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 SPECC1Q5M775 1068 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 TRIML1Q8N9V2 468 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 NUP133Q8WUM0 1156 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 DPF2Q92785 391 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 L2HGDHQ9H9P8 463 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 DACH1Q9UI36 760 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 MAGEB6P1A0A0J9YX57 407 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 XBP1P17861 261 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 NR5A1Q13285 461 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 PCDHB6Q9Y5E3 794 aa18.38■□□□□ 0.53
CHMP1A-202ENST00000535997 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 AKAP17AQ02040 695 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 DDB1Q16531 1140 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 ADGRA1Q86SQ6 560 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 CMTR1Q8N1G2 835 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 OGFRQ9NZT2 677 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 ABCF2Q9UG63 623 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 MAN1B1Q9UKM7 699 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 FOXN1O15353 648 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 GRIN1Q05586 938 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 UBE4AQ14139 1066 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 CABP5Q9NP86 173 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
CHMP1A-202ENST00000535997 TNKSO95271 1327 aa18.36■□□□□ 0.53
CHMP1A-202ENST00000535997 PCP11498 1178 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-202ENST00000535997 PDE4BQ07343 736 aa18.36■□□□□ 0.53
CHMP1A-202ENST00000535997 ENOX1Q8TC92 643 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-202ENST00000535997 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
CHMP1A-202ENST00000535997 SMARCE1Q969G3 411 aa18.36■□□□□ 0.53
CHMP1A-202ENST00000535997 ZNF652Q9Y2D9 606 aa18.36■□□□□ 0.53
CHMP1A-202ENST00000535997 SPDYE4A6NLX3 237 aa18.35■□□□□ 0.53
CHMP1A-202ENST00000535997 ITPK1Q13572 414 aa18.35■□□□□ 0.53
CHMP1A-202ENST00000535997 MORC3Q14149 939 aa18.35■□□□□ 0.53
CHMP1A-202ENST00000535997 CLEC4GQ6UXB4 293 aa18.35■□□□□ 0.53
CHMP1A-202ENST00000535997 CCDC34Q96HJ3 373 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms