RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 CTNND1O60716 968 aaKnown RBP11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 RFX5P48382 616 aaPredicted RBP11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 SPP2Q13103 211 aa11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 SHHQ15465 462 aa11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 Q3C1V9 767 aa11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 ZNF384Q8TF68 577 aa11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 PRKRIP1Q9H875 184 aaPredicted RBP11.13□□□□□ -0.63
LRTOMT-211ENST00000535883 MAST3O60307 1309 aa11.12□□□□□ -0.63
LRTOMT-211ENST00000535883 ALDH1L1O75891 902 aa11.12□□□□□ -0.63
LRTOMT-211ENST00000535883 SHROOM1Q2M3G4 852 aaPredicted RBP11.12□□□□□ -0.63
LRTOMT-211ENST00000535883 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
LRTOMT-211ENST00000535883 WDR66Q8TBY9 1149 aa11.12□□□□□ -0.63
LRTOMT-211ENST00000535883 P2RX7Q99572 595 aaKnown RBP11.12□□□□□ -0.63
LRTOMT-211ENST00000535883 MORF4L1Q9UBU8 362 aa11.12□□□□□ -0.63
LRTOMT-211ENST00000535883 GAKO14976 1311 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 ENTPD3O75355 529 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 HMGCS2P54868 508 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 SLC4A10Q6U841 1118 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 PORCNQ9H237 461 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 FLRT1Q9NZU1 646 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 RBPJLQ9UBG7 517 aa11.11□□□□□ -0.63
LRTOMT-211ENST00000535883 IL16Q14005 1332 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 DOCK1Q14185 1865 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 DOCK2Q92608 1830 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 PHKA1P46020 1223 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 GCLCP48506 637 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 ATN1P54259 1190 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 RHBDL3P58872 404 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 PUM3Q15397 648 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 MORN1Q5T089 497 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 SRCIN1Q9C0H9 1055 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 LRRFIP2Q9Y608 721 aaKnown RBP11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 LOC285556D6RIA3 1793 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 CACNA1FO60840 1977 aa11.1□□□□□ -0.63
LRTOMT-211ENST00000535883 LDHBP07195 334 aaKnown RBP11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 XRCC5P13010 732 aaKnown RBP11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 ITGB8P26012 769 aa11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 TRPV1Q8NER1 839 aa11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 SENP6Q9GZR1 1112 aaPredicted RBP11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 LTBP2Q14767 1821 aa11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
LRTOMT-211ENST00000535883 TBC1D12O60347 775 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 IGHA2P01877 340 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 IFIT1P09914 478 aaKnown RBP11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 ADORA1P30542 326 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 EPHB4P54760 987 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 PICALMQ13492 652 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 SH3RF1Q7Z6J0 888 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 ZSCAN29Q8IWY8 852 aaPredicted RBP11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 LPIN2Q92539 896 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 USP44Q9H0E7 712 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 NCOR1O75376 2440 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 MAST2Q6P0Q8 1798 aa11.08□□□□□ -0.64
LRTOMT-211ENST00000535883 MYH2Q9UKX2 1941 aa11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 EYA2O00167 538 aa11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 CAP2P40123 477 aa11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 GRIN2CQ14957 1233 aa11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 NUDT12Q9BQG2 462 aa11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.07□□□□□ -0.64
LRTOMT-211ENST00000535883 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 TRIM43BA6NCK2 446 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 CNMDO75829 334 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 HOXA7P31268 230 aaPredicted RBP11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 BTDP43251 543 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 RTP1P59025 263 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 HERVK_113P62684 666 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 NCBP3Q53F19 620 aaKnown RBP11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 GPR142Q7Z601 462 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 BADQ92934 168 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 TRIM43Q96BQ3 446 aaPredicted RBP11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
LRTOMT-211ENST00000535883 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 GPR75-ASB3A0A0A6YYF3 556 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 SLC5A1P13866 664 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 MTMR2Q13614 643 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 RASGRF1Q13972 1273 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 GPRC5AQ8NFJ5 357 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 NPLOC4Q8TAT6 608 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 LBHD1Q9BQE6 289 aaPredicted RBP11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 OSBPL5Q9H0X9 879 aaPredicted RBP11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 DNAJC18Q9H819 358 aa11.05□□□□□ -0.64
LRTOMT-211ENST00000535883 USP17L5A8MUK1 530 aa11.04□□□□□ -0.64
LRTOMT-211ENST00000535883 FOSL2P15408 326 aa11.04□□□□□ -0.64
LRTOMT-211ENST00000535883 ZEB1P37275 1124 aaPredicted RBP11.04□□□□□ -0.64
LRTOMT-211ENST00000535883 PLA2G5P39877 138 aa11.04□□□□□ -0.64
LRTOMT-211ENST00000535883 BACE1P56817 501 aa11.04□□□□□ -0.64
LRTOMT-211ENST00000535883 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
LRTOMT-211ENST00000535883 ERVK-24P63145 666 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms