RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 YARSP54577 528 aaKnown RBP4.98□□□□□ -1.61
SNHG1-202ENST00000535689 SOX4Q06945 474 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-202ENST00000535689 FOXD4L6Q3SYB3 417 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-202ENST00000535689 TNNI3KQ59H18 835 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 GPAT2Q6NUI2 795 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 FOXD4L3Q6VB84 417 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-202ENST00000535689 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.98□□□□□ -1.61
SNHG1-202ENST00000535689 SLC51AQ86UW1 340 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 GALNT11Q8NCW6 608 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 GPBAR1Q8TDU6 330 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 UBXN4Q92575 508 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 FERD3LQ96RJ6 166 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 GMLQ99445 158 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.98□□□□□ -1.611e-17■■■□□ 16.5
SNHG1-202ENST00000535689 TRIM56Q9BRZ2 755 aaKnown RBP4.98□□□□□ -1.61
SNHG1-202ENST00000535689 TANGO6Q9C0B7 1094 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 CACNA2D2Q9NY47 1150 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 TLR6Q9Y2C9 796 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 CARMIL2Q6F5E8 1435 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 GLI2P10070 1586 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 F8W735 103 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-202ENST00000535689 PAGE1O75459 146 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 STK10O94804 968 aaKnown RBP4.97□□□□□ -1.61
SNHG1-202ENST00000535689 FAM160A1Q05DH4 1040 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 RAD51AP2Q09MP3 1159 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 PLA2G4EQ3MJ16 856 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 AKAP4Q5JQC9 854 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 ZNF746Q6NUN9 644 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-202ENST00000535689 FBXL19Q6PCT2 694 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 REC114Q7Z4M0 266 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 TXNRD3Q86VQ6 643 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 RNF214Q8ND24 703 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 ZC3H12CQ9C0D7 883 aaKnown RBP4.97□□□□□ -1.61
SNHG1-202ENST00000535689 ACBD3Q9H3P7 528 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 CCDC86Q9H6F5 360 aaKnown RBP4.97□□□□□ -1.61
SNHG1-202ENST00000535689 PCOLCE2Q9UKZ9 415 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 AP4E1Q9UPM8 1137 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 PCDHGB7Q9Y5F8 929 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 PTPRGP23470 1445 aa4.97□□□□□ -1.61
SNHG1-202ENST00000535689 ADAMTS12P58397 1594 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 DISP3Q9P2K9 1392 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 KRBA1A5PL33 1030 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 U2SURPO15042 1029 aaKnown RBP4.96□□□□□ -1.62
SNHG1-202ENST00000535689 GSC2O15499 205 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 DHX15O43143 795 aaKnown RBP4.96□□□□□ -1.62
SNHG1-202ENST00000535689 GLB1P16278 677 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 ATF4P18848 351 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-202ENST00000535689 LIG1P18858 919 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 DNAJA1P31689 397 aaKnown RBP4.96□□□□□ -1.62
SNHG1-202ENST00000535689 ASPAP45381 313 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 ETF1P62495 437 aaKnown RBP4.96□□□□□ -1.62
SNHG1-202ENST00000535689 RACK1P63244 317 aaKnown RBP4.96□□□□□ -1.62
SNHG1-202ENST00000535689 ZC3H12AQ5D1E8 599 aaKnown RBP4.96□□□□□ -1.62
SNHG1-202ENST00000535689 NBPF6Q5VWK0 638 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 DYMQ7RTS9 669 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 HID1Q8IV36 788 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 CKAP2LQ8IYA6 745 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 NBPF4Q96M43 638 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 WDR18Q9BV38 432 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 NRSN2Q9GZP1 204 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 COPRSQ9NQ92 184 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 PRKAG2Q9UGJ0 569 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 ADAMTS1Q9UHI8 967 aa4.96□□□□□ -1.62
SNHG1-202ENST00000535689 ADCY10Q96PN6 1610 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 FAM221AA4D161 298 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 FAM229AH3BQW9 127 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 RNGTTO60942 597 aaKnown RBP4.95□□□□□ -1.62
SNHG1-202ENST00000535689 ATE1O95260 518 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 F13A1P00488 732 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 ADH5P11766 374 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 PLCG1P19174 1290 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 CYP7A1P22680 504 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 CCNFP41002 786 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 SOX9P48436 509 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 EIF6P56537 245 aaKnown RBP4.95□□□□□ -1.62
SNHG1-202ENST00000535689 ADGRE1Q14246 886 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 GRIK4Q16099 956 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 SEZ6Q53EL9 994 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 WIPI1Q5MNZ9 446 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-202ENST00000535689 SLC6A19Q695T7 634 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 PAOXQ6QHF9 649 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 ADAMTSL4Q6UY14 1074 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 MFSD2AQ8NA29 543 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 GRIN3AQ8TCU5 1115 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 WFDC12Q8WWY7 111 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 COX4I2Q96KJ9 171 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 SRRTQ9BXP5 876 aaKnown RBP4.95□□□□□ -1.62
SNHG1-202ENST00000535689 WNT10AQ9GZT5 417 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 CRIM1Q9NZV1 1036 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 PCDHB5Q9Y5E4 795 aa4.95□□□□□ -1.62
SNHG1-202ENST00000535689 KIAA0586Q9BVV6 1533 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 DDX3YO15523 660 aaKnown RBP4.94□□□□□ -1.62
SNHG1-202ENST00000535689 IGHA1P01876 353 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 PGRP06401 933 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 RXRBP28702 533 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 GATA4P43694 442 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 RBM10P98175 930 aaKnown RBP4.94□□□□□ -1.62
SNHG1-202ENST00000535689 CYP27A1Q02318 531 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 SEPT6Q14141 434 aa4.94□□□□□ -1.62
SNHG1-202ENST00000535689 FBXW10Q5XX13 1052 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms