RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 SKOR2Q2VWA4 1001 aaPredicted RBP27.86■■■□□ 2.05
PTPMT1-205ENST00000534775 DACT2Q5SW24 774 aa27.86■■■□□ 2.05
PTPMT1-205ENST00000534775 MAPKAPK5Q8IW41 473 aa27.86■■■□□ 2.05
PTPMT1-205ENST00000534775 MRIQ9BWK5 157 aa27.86■■■□□ 2.05
PTPMT1-205ENST00000534775 CPLX2Q6PUV4 134 aaKnown RBP27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 DDX11Q96FC9 970 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 MXD3Q9BW11 206 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 PSME4Q14997 1843 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 SMIM22K7EJ46 135 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 DTNBO60941 627 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 CDKL5O76039 1030 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 POLR3DP05423 398 aaPredicted RBP27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 RCAN1P53805 252 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 ILDR2Q71H61 639 aa27.85■■■□□ 2.05
PTPMT1-205ENST00000534775 FLT1P17948 1338 aa27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 MYH1P12882 1939 aa27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 PSDA5PKW4 1024 aaPredicted RBP27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 HDLBPQ00341 1268 aaKnown RBP27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 ZSCAN10Q96SZ4 725 aaPredicted RBP27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 ZKSCAN3Q9BRR0 538 aa27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 ZNF287Q9HBT7 754 aa27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 TNKSO95271 1327 aa27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 NID2Q14112 1375 aa27.84■■■□□ 2.05
PTPMT1-205ENST00000534775 TRAK2O60296 914 aa27.83■■■□□ 2.05
PTPMT1-205ENST00000534775 PRDM1O75626 825 aa27.83■■■□□ 2.05
PTPMT1-205ENST00000534775 SENP2Q9HC62 589 aa27.83■■■□□ 2.05
PTPMT1-205ENST00000534775 KCNQ5Q9NR82 932 aa27.83■■■□□ 2.05
PTPMT1-205ENST00000534775 BRCA1P38398 1863 aaKnown RBP27.82■■■□□ 2.04
PTPMT1-205ENST00000534775 GOLGA8AA7E2F4 631 aa27.82■■■□□ 2.04
PTPMT1-205ENST00000534775 SEC23AQ15436 765 aa27.82■■■□□ 2.04
PTPMT1-205ENST00000534775 MICU3Q86XE3 530 aa27.82■■■□□ 2.04
PTPMT1-205ENST00000534775 H3BQV1 296 aa27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 SCNN1DP51172 638 aa27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 DALRD3Q5D0E6 543 aaKnown RBP27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 IFFO2Q5TF58 517 aa27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 ECM29Q5VYK3 1845 aa27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 CRKP46108 304 aa27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 ZDHHC15Q96MV8 337 aa27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 SAP30BPQ9UHR5 308 aaKnown RBP27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 CD2APQ9Y5K6 639 aa27.81■■■□□ 2.04
PTPMT1-205ENST00000534775 CDC37L1Q7L3B6 337 aa27.8■■■□□ 2.04
PTPMT1-205ENST00000534775 RAB11FIP4Q86YS3 637 aa27.8■■■□□ 2.04
PTPMT1-205ENST00000534775 ADAMTSL1Q8N6G6 1762 aa27.8■■■□□ 2.04
PTPMT1-205ENST00000534775 TSPY2A6NKD2 308 aa27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 EVX2Q03828 476 aa27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 IFIT1BQ5T764 474 aaKnown RBP27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 KIAA0825Q8IV33 1275 aa27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 LARGE2Q8N3Y3 721 aa27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 ENAHQ8N8S7 591 aaPredicted RBP27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 SGIP1Q9BQI5 828 aa27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 MKNK2Q9HBH9 465 aa27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 USP40Q9NVE5 1235 aa27.79■■■□□ 2.04
PTPMT1-205ENST00000534775 MYO3BQ8WXR4 1341 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 CCDC196A0A1B0GTZ2 297 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 PPP2R5BQ15173 497 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 CCDC178Q5BJE1 867 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 ZNF654Q8IZM8 581 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 SERPINA10Q9UK55 444 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 RGS22Q8NE09 1264 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 LMBRD1Q9NUN5 540 aa27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 ORC3Q9UBD5 711 aaPredicted RBP27.78■■■□□ 2.04
PTPMT1-205ENST00000534775 YDJCA8MPS7 323 aa27.77■■■□□ 2.04
PTPMT1-205ENST00000534775 PLCD1P51178 756 aa27.77■■■□□ 2.04
PTPMT1-205ENST00000534775 SLC4A8Q2Y0W8 1093 aa27.77■■■□□ 2.04
PTPMT1-205ENST00000534775 APOBEC3HQ6NTF7 200 aaKnown RBP27.77■■■□□ 2.04
PTPMT1-205ENST00000534775 ZNF277Q9NRM2 450 aaPredicted RBP27.77■■■□□ 2.04
PTPMT1-205ENST00000534775 RXRAP19793 462 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 ADD1P35611 737 aaKnown RBP27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 RTN1Q16799 776 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 CDC42EP5Q6NZY7 148 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 C16orf86Q6ZW13 317 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 CATIPQ7Z7H3 387 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 TTC6Q86TZ1 520 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 DYNLL2Q96FJ2 89 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 MYL10Q9BUA6 226 aa27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 ZSCAN16Q9H4T2 348 aaPredicted RBP27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 PPP1R1BQ9UD71 204 aaPredicted RBP27.76■■■□□ 2.03
PTPMT1-205ENST00000534775 PRPF40AO75400 957 aaKnown RBP27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 WDHD1O75717 1129 aaPredicted RBP27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 CALM1P0DP23 149 aa27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 CALM2P0DP24 149 aa27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 CALM3P0DP25 149 aa27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 FDPSP14324 419 aaKnown RBP27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 CDC27P30260 824 aa27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 FAM47AQ5JRC9 791 aa27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 ZNF444Q8N0Y2 327 aaPredicted RBP27.75■■■□□ 2.03
PTPMT1-205ENST00000534775 TFAP4Q01664 338 aa27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 PICALMQ13492 652 aa27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 CSPP1Q1MSJ5 1256 aa27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 FER1L6Q2WGJ9 1857 aa27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 FOXD4L6Q3SYB3 417 aaPredicted RBP27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 FOXD4L3Q6VB84 417 aaPredicted RBP27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 CCDC144CPQ8IYA2 1237 aa27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 NIM1KQ8IY84 436 aa27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 CHAMP1Q96JM3 812 aa27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 FAM217BQ9NTX9 383 aaPredicted RBP27.74■■■□□ 2.03
PTPMT1-205ENST00000534775 STK36Q9NRP7 1315 aa27.73■■■□□ 2.03
PTPMT1-205ENST00000534775 DDAH1O94760 285 aa27.73■■■□□ 2.03
PTPMT1-205ENST00000534775 IARSP41252 1262 aaKnown RBP27.73■■■□□ 2.03
PTPMT1-205ENST00000534775 RBM5P52756 815 aaKnown RBP eCLIP27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms