RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 DENND2AQ9ULE3 1009 aa11.01□□□□□ -0.65
CCDC90B-219ENST00000534753 APBB1O00213 710 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 HSPA8P11142 646 aaKnown RBP11□□□□□ -0.65
CCDC90B-219ENST00000534753 PRDX5P30044 214 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 TNNI2P48788 182 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 TNFAIP1Q13829 316 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 MVPQ14764 893 aaKnown RBP11□□□□□ -0.65
CCDC90B-219ENST00000534753 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 RASAL3Q86YV0 1011 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 TMEM39BQ9GZU3 492 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 TMOD2Q9NZR1 351 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 SEPT9Q9UHD8 586 aaPredicted RBP11□□□□□ -0.65
CCDC90B-219ENST00000534753 MAST3O60307 1309 aa11□□□□□ -0.65
CCDC90B-219ENST00000534753 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
CCDC90B-219ENST00000534753 MYH13Q9UKX3 1938 aa10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 ARAP2Q8WZ64 1704 aa10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 PAPPA2Q9BXP8 1791 aa10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 SLC10A3P09131 477 aa10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 RASGRF1Q13972 1273 aa10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 DZIP1Q86YF9 867 aaKnown RBP10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 SSH3Q8TE77 659 aa10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC90B-219ENST00000534753 TRPA1O75762 1119 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 HDLBPQ00341 1268 aaKnown RBP10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 TCP10Q12799 353 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 TTC39AQ5SRH9 613 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 CEP85Q6P2H3 762 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 PI16Q6UXB8 463 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 TBC1D9Q6ZT07 1266 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 CLMNQ96JQ2 1002 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 ZDHHC15Q96MV8 337 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 SNRKQ9NRH2 765 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 EXOC6BQ9Y2D4 811 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 SUGT1Q9Y2Z0 365 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 PPP2R3BQ9Y5P8 575 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
CCDC90B-219ENST00000534753 IREB2P48200 963 aaKnown RBP10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 TNNI3KQ59H18 835 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 C20orf194Q5TEA3 1177 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 APOBEC3HQ6NTF7 200 aaKnown RBP10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 HHIPL2Q6UWX4 724 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 ZGPATQ8N5A5 531 aaKnown RBP10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 RDH13Q8NBN7 331 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 DBNDD2Q9BQY9 259 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 CCDC8Q9H0W5 538 aaPredicted RBP10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 USP40Q9NVE5 1235 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 RAI14Q9P0K7 980 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 DDX19BQ9UMR2 479 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 DAGLAQ9Y4D2 1042 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 FPGT-TNNI3KV9GXZ4 949 aa10.97□□□□□ -0.65
CCDC90B-219ENST00000534753 THSD7BQ9C0I4 1608 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 SSC5DA1L4H1 1573 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 USP2O75604 605 aaPredicted RBP10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 NDUFV2P19404 249 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 EMP3P54852 163 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 MCM6Q14566 821 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 CSPP1Q1MSJ5 1256 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 CCDC158Q5M9N0 1113 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 SPTY2D1Q68D10 685 aaPredicted RBP10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 CDC42EP5Q6NZY7 148 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 SPATA5Q8NB90 893 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 ELP3Q9H9T3 547 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 PRDM10Q9NQV6 1147 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 RNF186Q9NXI6 227 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 HMG20BQ9P0W2 317 aa10.96□□□□□ -0.65
CCDC90B-219ENST00000534753 MOXD2PA6NHM9 499 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 CA12O43570 354 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 UQCRFS1P1P0C7P4 283 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 MIGA2Q7L4E1 593 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 MRIQ9BWK5 157 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 IL1RAPL2Q9NP60 686 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 TLR7Q9NYK1 1049 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 LRP2BPQ9P2M1 347 aa10.95□□□□□ -0.66
CCDC90B-219ENST00000534753 SALL1Q9NSC2 1324 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 MCAMP43121 646 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 MECOMQ03112 1051 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 PICALMQ13492 652 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 SWT1Q5T5J6 900 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 SPRYD7Q5W111 196 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 AACSQ86V21 672 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 ZSCAN29Q8IWY8 852 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 ANKRD13AQ8IZ07 590 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 TEPSINQ96N21 525 aa10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 NOP58Q9Y2X3 529 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-219ENST00000534753 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
CCDC90B-219ENST00000534753 HMMRO75330 724 aa10.93□□□□□ -0.66
CCDC90B-219ENST00000534753 TBC1D8O95759 1140 aa10.93□□□□□ -0.66
CCDC90B-219ENST00000534753 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-219ENST00000534753 BTDP43251 543 aa10.93□□□□□ -0.66
CCDC90B-219ENST00000534753 SREBF2Q12772 1141 aa10.93□□□□□ -0.66
CCDC90B-219ENST00000534753 NFIAQ12857 509 aa10.93□□□□□ -0.66
CCDC90B-219ENST00000534753 ERC1Q8IUD2 1116 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms