RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 GPR25O00155 361 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 CA12O43570 354 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 PRKAB2O43741 272 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 HMMRO75330 724 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 MAP4K4O95819 1239 aaPredicted RBP6.18□□□□□ -1.42
USH1C-210ENST00000534556 LDHCP07864 332 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 CYP2D6P10635 497 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 PTPRAP18433 802 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 CTGFP29279 349 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 IRX6P78412 446 aaPredicted RBP6.18□□□□□ -1.42
USH1C-210ENST00000534556 CRHR2Q13324 411 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 PPIL2Q13356 520 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 CCL15Q16663 113 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 HSP90AB4PQ58FF6 505 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 ERO1BQ86YB8 467 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 CLASRPQ8N2M8 674 aaKnown RBP6.18□□□□□ -1.42
USH1C-210ENST00000534556 LCORLQ8N3X6 602 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 PI4K2BQ8TCG2 481 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 DNAJC2Q99543 621 aaKnown RBP6.18□□□□□ -1.42
USH1C-210ENST00000534556 LRRCC1Q9C099 1032 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 MCOLN1Q9GZU1 580 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 PAG1Q9NWQ8 432 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 KCNH4Q9UQ05 1017 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 ADGRA2Q96PE1 1338 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 ZNF532Q9HCE3 1301 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 LAMA4Q16363 1823 aa6.18□□□□□ -1.42
USH1C-210ENST00000534556 ALPK3Q96L96 1907 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 A0A0G2JMZ2 1700 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 CYP2D7A0A087X1C5 515 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 TBC1D12O60347 775 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 IFIT2P09913 472 aaKnown RBP6.17□□□□□ -1.42
USH1C-210ENST00000534556 ADD2P35612 726 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 PLCD1P51178 756 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 GSTO1P78417 241 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 SREBF2Q12772 1141 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 SLC9C2Q5TAH2 1124 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 DCAF15Q66K64 600 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 POTEEQ6S8J3 1075 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 ZSCAN29Q8IWY8 852 aaPredicted RBP6.17□□□□□ -1.42
USH1C-210ENST00000534556 SLF2Q8IX21 1173 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 SDR42E1Q8WUS8 393 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 ABHD8Q96I13 439 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 BEGAINQ9BUH8 593 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 PUS7LQ9H0K6 701 aaKnown RBP6.17□□□□□ -1.42
USH1C-210ENST00000534556 ARMT1Q9H993 441 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 AFG3L2Q9Y4W6 797 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 CSADQ9Y600 493 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 FRMPD3Q5JV73 1810 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 PLXNA1Q9UIW2 1896 aa6.17□□□□□ -1.42
USH1C-210ENST00000534556 LAMA2P24043 3122 aaKnown RBP6.16□□□□□ -1.42
USH1C-210ENST00000534556 A0A0G2JLL6 359 aaPredicted RBP6.16□□□□□ -1.42
USH1C-210ENST00000534556 FOXP2O15409 715 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 PEX10O60683 326 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 GUCY1A2P33402 732 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 CAP2P40123 477 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 GTF2A2P52657 109 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 INHBEP58166 350 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 PPATQ06203 517 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 NOM1Q5C9Z4 860 aaKnown RBP6.16□□□□□ -1.42
USH1C-210ENST00000534556 TREML2Q5T2D2 321 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 PRRT2Q7Z6L0 340 aaPredicted RBP6.16□□□□□ -1.42
USH1C-210ENST00000534556 REM2Q8IYK8 340 aaPredicted RBP6.16□□□□□ -1.42
USH1C-210ENST00000534556 SCYL3Q8IZE3 742 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 SLC44A5Q8NCS7 719 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 CD99L2Q8TCZ2 262 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 OSBP2Q969R2 916 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 SEC62Q99442 399 aaKnown RBP6.16□□□□□ -1.42
USH1C-210ENST00000534556 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.16□□□□□ -1.42
USH1C-210ENST00000534556 ZHX2Q9Y6X8 837 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 MCM3APO60318 1980 aa6.16□□□□□ -1.42
USH1C-210ENST00000534556 MAGEB6P1A0A0J9YX57 407 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 M0R2C6 588 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 CTNND1O60716 968 aaKnown RBP6.15□□□□□ -1.42
USH1C-210ENST00000534556 FKTNO75072 461 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 ECM2O94769 699 aaPredicted RBP6.15□□□□□ -1.42
USH1C-210ENST00000534556 MBD4O95243 580 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 GDF11O95390 407 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 BAG3O95817 575 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 CYP2C8P10632 490 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 SHMT1P34896 483 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 GABPAQ06546 454 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 MAP3K12Q12852 859 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 HDAC1Q13547 482 aaPredicted RBP6.15□□□□□ -1.42
USH1C-210ENST00000534556 TATDN1Q6P1N9 297 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 OTOP1Q7RTM1 612 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 CLEC10AQ8IUN9 316 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 SMC5Q8IY18 1101 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 DYNLL2Q96FJ2 89 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 CHMP4BQ9H444 224 aaKnown RBP6.15□□□□□ -1.42
USH1C-210ENST00000534556 DCP1AQ9NPI6 582 aaPredicted RBP6.15□□□□□ -1.42
USH1C-210ENST00000534556 ECHDC1Q9NTX5 307 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 TACC3Q9Y6A5 838 aa6.15□□□□□ -1.42
USH1C-210ENST00000534556 LCTP09848 1927 aa6.15□□□□□ -1.43
USH1C-210ENST00000534556 TRIM75PA6NK02 468 aa6.14□□□□□ -1.43
USH1C-210ENST00000534556 GSG1L2A8MUP6 293 aa6.14□□□□□ -1.43
USH1C-210ENST00000534556 PDHXO00330 501 aa6.14□□□□□ -1.43
USH1C-210ENST00000534556 BCRP11274 1271 aa6.14□□□□□ -1.43
USH1C-210ENST00000534556 CETPP11597 493 aa6.14□□□□□ -1.43
USH1C-210ENST00000534556 PLCG2P16885 1265 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms