RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NKD1Q969G9 470 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 ISL2Q96A47 359 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 GPRASP2Q96D09 838 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 WNT10AQ9GZT5 417 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 KCNF1Q9H3M0 494 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 CAPN10Q9HC96 672 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 BRMS1Q9HCU9 246 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 CORINQ9Y5Q5 1042 aa10.37□□□□□ -0.75
CASP4-213ENST00000534356 GRIN3BO60391 1043 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 RXRBP28702 533 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 GRK4P32298 578 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 GJA8P48165 433 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 UBE3DQ7Z6J8 389 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 SLITRK4Q8IW52 837 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 SMYD4Q8IYR2 804 aaPredicted RBP10.36□□□□□ -0.75
CASP4-213ENST00000534356 EZH1Q92800 747 aaPredicted RBP10.36□□□□□ -0.75
CASP4-213ENST00000534356 SEMA6CQ9H3T2 930 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 TACC3Q9Y6A5 838 aa10.36□□□□□ -0.75
CASP4-213ENST00000534356 ETF1P62495 437 aaKnown RBP10.35□□□□□ -0.75
CASP4-213ENST00000534356 BEND4Q6ZU67 534 aa10.35□□□□□ -0.75
CASP4-213ENST00000534356 TINF2Q9BSI4 451 aa10.35□□□□□ -0.75
CASP4-213ENST00000534356 YIPF2Q9BWQ6 316 aa10.35□□□□□ -0.75
CASP4-213ENST00000534356 LGR6Q9HBX8 967 aa10.35□□□□□ -0.75
CASP4-213ENST00000534356 DAGLAQ9Y4D2 1042 aa10.35□□□□□ -0.75
CASP4-213ENST00000534356 FAM95CA0A1B0GW59 222 aa10.34□□□□□ -0.75
CASP4-213ENST00000534356 PRR23CQ6ZRP0 262 aa10.34□□□□□ -0.75
CASP4-213ENST00000534356 ZNF507Q8TCN5 953 aa10.34□□□□□ -0.75
CASP4-213ENST00000534356 RASGRP4Q8TDF6 673 aa10.34□□□□□ -0.75
CASP4-213ENST00000534356 RAXQ9Y2V3 346 aa10.34□□□□□ -0.75
CASP4-213ENST00000534356 DYNC1LI2O43237 492 aaPredicted RBP10.33□□□□□ -0.76
CASP4-213ENST00000534356 MCM4P33991 863 aa10.33□□□□□ -0.76
CASP4-213ENST00000534356 ZC3H6P61129 1189 aaKnown RBP10.33□□□□□ -0.76
CASP4-213ENST00000534356 CLEC10AQ8IUN9 316 aa10.33□□□□□ -0.76
CASP4-213ENST00000534356 FAM83CQ9BQN1 747 aa10.33□□□□□ -0.76
CASP4-213ENST00000534356 FBRSQ9HAH7 460 aa10.33□□□□□ -0.76
CASP4-213ENST00000534356 SSU72Q9NP77 194 aaKnown RBP10.33□□□□□ -0.76
CASP4-213ENST00000534356 GINM1Q9NU53 330 aa10.33□□□□□ -0.76
CASP4-213ENST00000534356 STOML1Q9UBI4 398 aa10.33□□□□□ -0.76
CASP4-213ENST00000534356 PRR36Q9H6K5 1346 aa10.33□□□□□ -0.76
CASP4-213ENST00000534356 HMX2A2RU54 273 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 IGHA1P01876 353 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 PGRP06401 933 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 CLCQ05315 142 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 PDE4BQ07343 736 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 NFKBIBQ15653 356 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 C7orf69Q9H7B7 122 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 PCOLCE2Q9UKZ9 415 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 PCDHB14Q9Y5E9 798 aa10.32□□□□□ -0.76
CASP4-213ENST00000534356 HTR3BO95264 441 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 PLCG1P19174 1290 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 MAP7Q14244 749 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 NKAPLQ5M9Q1 402 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 SEZ6L2Q6UXD5 910 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 GK5Q6ZS86 529 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 CDC37L1Q7L3B6 337 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.31□□□□□ -0.76
CASP4-213ENST00000534356 EFR3BQ9Y2G0 817 aa10.31□□□□□ -0.76
CASP4-213ENST00000534356 ZNF165P49910 485 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 NKG7Q16617 165 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 RSPO4Q2I0M5 234 aaPredicted RBP10.3□□□□□ -0.76
CASP4-213ENST00000534356 NAALADL2Q58DX5 795 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 HID1Q8IV36 788 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 REXO1Q8N1G1 1221 aaKnown RBP10.3□□□□□ -0.76
CASP4-213ENST00000534356 SPATA32Q96LK8 384 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 EHMT1Q9H9B1 1298 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 REV1Q9UBZ9 1251 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 TJP2Q9UDY2 1190 aa10.3□□□□□ -0.76
CASP4-213ENST00000534356 ATE1O95260 518 aa10.29□□□□□ -0.76
CASP4-213ENST00000534356 H2AFB1P0C5Y9 115 aa10.29□□□□□ -0.76
CASP4-213ENST00000534356 H2AFB2P0C5Z0 115 aa10.29□□□□□ -0.76
CASP4-213ENST00000534356 GNL2Q13823 731 aaKnown RBP10.29□□□□□ -0.76
CASP4-213ENST00000534356 SLBPQ14493 270 aaKnown RBP eCLIP10.29□□□□□ -0.76
CASP4-213ENST00000534356 PAOXQ6QHF9 649 aa10.29□□□□□ -0.76
CASP4-213ENST00000534356 KCT2Q8NC54 265 aa10.29□□□□□ -0.76
CASP4-213ENST00000534356 ACSF2Q96CM8 615 aaPredicted RBP10.29□□□□□ -0.76
CASP4-213ENST00000534356 ADAM30Q9UKF2 790 aa10.29□□□□□ -0.76
CASP4-213ENST00000534356 TMEM201Q5SNT2 666 aa10.28□□□□□ -0.76
CASP4-213ENST00000534356 C8orf37Q96NL8 207 aa10.28□□□□□ -0.76
CASP4-213ENST00000534356 C1GALT1Q9NS00 363 aa10.28□□□□□ -0.76
CASP4-213ENST00000534356 PPT2Q9UMR5 302 aa10.28□□□□□ -0.76
CASP4-213ENST00000534356 ATF4P18848 351 aaPredicted RBP10.27□□□□□ -0.77
CASP4-213ENST00000534356 SOX9P48436 509 aa10.27□□□□□ -0.77
CASP4-213ENST00000534356 NASPP49321 788 aaPredicted RBP10.27□□□□□ -0.77
CASP4-213ENST00000534356 SLC43A3Q8NBI5 491 aa10.27□□□□□ -0.77
CASP4-213ENST00000534356 PSMG3-AS1Q96PY0 264 aa10.27□□□□□ -0.77
CASP4-213ENST00000534356 PRKAG2Q9UGJ0 569 aa10.27□□□□□ -0.77
CASP4-213ENST00000534356 DNAJA2O60884 412 aa10.26□□□□□ -0.77
CASP4-213ENST00000534356 CDK5R2Q13319 367 aa10.26□□□□□ -0.77
CASP4-213ENST00000534356 COL9A2Q14055 689 aaPredicted RBP10.26□□□□□ -0.77
CASP4-213ENST00000534356 MCATQ8IVS2 390 aaKnown RBP10.26□□□□□ -0.77
CASP4-213ENST00000534356 SEC16BQ96JE7 1060 aa10.26□□□□□ -0.77
CASP4-213ENST00000534356 TMEM87BQ96K49 555 aa10.26□□□□□ -0.77
CASP4-213ENST00000534356 UPK3BL1B0FP48 263 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 UPK3BL2E5RIL1 263 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 FURINP09958 794 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 ADMP35318 185 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 CAP2P40123 477 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 CCDC81Q6ZN84 652 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 ARMCX6Q7L4S7 300 aa10.25□□□□□ -0.77
CASP4-213ENST00000534356 VPS37DQ86XT2 251 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms