RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 THOC2Q8NI27 1593 aaKnown RBP5.26□□□□□ -1.57
CSMD3-210ENST00000534172 GFRA2O00451 464 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 GSC2O15499 205 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 ATE1O95260 518 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 RING1Q06587 406 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 PAOXQ6QHF9 649 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 REC114Q7Z4M0 266 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 CLEC10AQ8IUN9 316 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 AGGF1Q8N302 714 aaeCLIP5.25□□□□□ -1.57
CSMD3-210ENST00000534172 PLPPR2Q96GM1 343 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 PRR36Q9H6K5 1346 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 PPP1R9AQ9ULJ8 1098 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 PCDHGB7Q9Y5F8 929 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 ALX3O95076 343 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 CAP2P40123 477 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 LRFN4Q6PJG9 635 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 HID1Q8IV36 788 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 UBXN4Q92575 508 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 EZH1Q92800 747 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-210ENST00000534172 WDR89Q96FK6 387 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-210ENST00000534172 EAF1Q96JC9 268 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-210ENST00000534172 SSBP4Q9BWG4 385 aaPredicted RBP5.25□□□□□ -1.57
CSMD3-210ENST00000534172 ACBD3Q9H3P7 528 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 EHMT1Q9H9B1 1298 aa5.25□□□□□ -1.57
CSMD3-210ENST00000534172 SSU72Q9NP77 194 aaKnown RBP5.25□□□□□ -1.57
CSMD3-210ENST00000534172 CDK11BP21127 795 aaKnown RBP5.24□□□□□ -1.57
CSMD3-210ENST00000534172 ARID5AQ03989 594 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 ZBTB37Q5TC79 503 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 FAM20CQ8IXL6 584 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 DISC1Q9NRI5 854 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 CDK11AQ9UQ88 783 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-210ENST00000534172 ACTL7BQ9Y614 415 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 RNGTTO60942 597 aaKnown RBP5.24□□□□□ -1.57
CSMD3-210ENST00000534172 H2AFB1P0C5Y9 115 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 H2AFB2P0C5Z0 115 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 CHRNA4P43681 627 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 PREPP48147 710 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 PLA2G4EQ3MJ16 856 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 TMEM201Q5SNT2 666 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 SLC6A19Q695T7 634 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 SMYD4Q8IYR2 804 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-210ENST00000534172 FAM83CQ9BQN1 747 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
CSMD3-210ENST00000534172 BAZ1AQ9NRL2 1556 aaPredicted RBP5.24□□□□□ -1.57
CSMD3-210ENST00000534172 DCDC2CA8MYV0 355 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 MAP4P27816 1152 aaKnown RBP5.23□□□□□ -1.57
CSMD3-210ENST00000534172 SOX9P48436 509 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 YARSP54577 528 aaKnown RBP5.23□□□□□ -1.57
CSMD3-210ENST00000534172 ETF1P62495 437 aaKnown RBP5.23□□□□□ -1.57
CSMD3-210ENST00000534172 PTPN11Q06124 597 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-210ENST00000534172 SEZ6Q53EL9 994 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 ARMC5Q96C12 935 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 MEGF10Q96KG7 1140 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 UBL7Q96S82 380 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-210ENST00000534172 GMLQ99445 158 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 TINF2Q9BSI4 451 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 ACSS3Q9H6R3 686 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 F6X3S4 739 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 MSTNO14793 375 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 BMP3P12645 472 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 RXRBP28702 533 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 MCM4P33991 863 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 GSK3AP49840 483 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 INPP5AQ14642 412 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 TP53INP1Q96A56 240 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 CRBNQ96SW2 442 aa5.23□□□□□ -1.57
CSMD3-210ENST00000534172 FAM95CA0A1B0GW59 222 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 C12orf40Q86WS4 652 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.22□□□□□ -1.57
CSMD3-210ENST00000534172 UBP1Q9NZI7 540 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 PRAMEF27A3QJZ7 478 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 TLR3O15455 904 aaKnown RBP5.22□□□□□ -1.57
CSMD3-210ENST00000534172 SMARCA5O60264 1052 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-210ENST00000534172 PGRP06401 933 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 DRD2P14416 443 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 GRK4P32298 578 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 TTLL4Q14679 1199 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 CPSF6Q16630 551 aaKnown RBP eCLIP5.22□□□□□ -1.57
CSMD3-210ENST00000534172 MPRIPQ6WCQ1 1025 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 MFSD2AQ8NA29 543 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 RBBP8NLQ8NC74 664 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-210ENST00000534172 FERD3LQ96RJ6 166 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 KCNF1Q9H3M0 494 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 BRMS1Q9HCU9 246 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 STOML1Q9UBI4 398 aa5.22□□□□□ -1.57
CSMD3-210ENST00000534172 ATF4P18848 351 aaPredicted RBP5.21□□□□□ -1.57
CSMD3-210ENST00000534172 PLCG1P19174 1290 aa5.21□□□□□ -1.57
CSMD3-210ENST00000534172 CYP27A1Q02318 531 aa5.21□□□□□ -1.57
CSMD3-210ENST00000534172 PPM1JQ5JR12 505 aa5.21□□□□□ -1.57
CSMD3-210ENST00000534172 MRPL41Q8IXM3 137 aaKnown RBP5.21□□□□□ -1.57
CSMD3-210ENST00000534172 ARMC10Q8N2F6 343 aa5.21□□□□□ -1.57
CSMD3-210ENST00000534172 CPLX3Q8WVH0 158 aa5.21□□□□□ -1.57
CSMD3-210ENST00000534172 LRIG2O94898 1065 aa5.21□□□□□ -1.58
CSMD3-210ENST00000534172 SOGA3Q5TF21 947 aa5.21□□□□□ -1.58
CSMD3-210ENST00000534172 BEND4Q6ZU67 534 aa5.21□□□□□ -1.58
CSMD3-210ENST00000534172 MCATQ8IVS2 390 aaKnown RBP5.21□□□□□ -1.58
CSMD3-210ENST00000534172 COX4I2Q96KJ9 171 aa5.21□□□□□ -1.58
CSMD3-210ENST00000534172 FAM105AQ9NUU6 356 aa5.21□□□□□ -1.58
CSMD3-210ENST00000534172 PCDHB14Q9Y5E9 798 aa5.21□□□□□ -1.58
CSMD3-210ENST00000534172 CSADQ9Y600 493 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms