RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 TCERG1O14776 1098 aaKnown RBP7.16□□□□□ -1.26
CHKA-208ENST00000533910 OPLAHO14841 1288 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 SPINT1O43278 529 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 MICAL2O94851 1124 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 MZF1P28698 734 aaPredicted RBP7.16□□□□□ -1.26
CHKA-208ENST00000533910 ORC1Q13415 861 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 C8orf34Q49A92 452 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 CCDC30Q5VVM6 783 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 INTS3Q68E01 1043 aaKnown RBP7.16□□□□□ -1.26
CHKA-208ENST00000533910 ITPRIPQ8IWB1 547 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 GJD3Q8N144 294 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 ZCRB1Q8TBF4 217 aaKnown RBP7.16□□□□□ -1.26
CHKA-208ENST00000533910 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 ZBTB40Q9NUA8 1239 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 PARP2Q9UGN5 583 aa7.16□□□□□ -1.26
CHKA-208ENST00000533910 PNMA6FA0A0J9YX94 578 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 KCNQ3O43525 872 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 TCF3P15923 654 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 EVA1CP58658 441 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 LDLRAD1Q5T700 205 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 C1orf53Q5VUE5 145 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 SUSD3Q96L08 255 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 DMRTB1Q96MA1 342 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 STK31Q9BXU1 1019 aa7.15□□□□□ -1.26
CHKA-208ENST00000533910 CHMP4BQ9H444 224 aaKnown RBP7.15□□□□□ -1.26
CHKA-208ENST00000533910 ATP10DQ9P241 1426 aa7.15□□□□□ -1.27
CHKA-208ENST00000533910 THSD7AQ9UPZ6 1657 aa7.15□□□□□ -1.27
CHKA-208ENST00000533910 NUP188Q5SRE5 1749 aa7.15□□□□□ -1.27
CHKA-208ENST00000533910 ERVV-2B6SEH9 535 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 IGHDP01880 384 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 PIP4K2BP78356 416 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 PTSQ03393 145 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 HDAC1Q13547 482 aaPredicted RBP7.14□□□□□ -1.27
CHKA-208ENST00000533910 COL19A1Q14993 1142 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 SPATA31A1Q5TZJ5 1347 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 ZNF790Q6PG37 636 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 G2E3Q7L622 706 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 RNF217Q8TC41 542 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 CITED4Q96RK1 184 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 ARFGEF2Q9Y6D5 1785 aa7.14□□□□□ -1.27
CHKA-208ENST00000533910 TJP1Q07157 1748 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 BCL9LQ86UU0 1499 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 IBTKQ9P2D0 1353 aaPredicted RBP7.13□□□□□ -1.27
CHKA-208ENST00000533910 SPATA31A6Q5VVP1 1343 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 ATP4AP20648 1035 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 GPC1P35052 558 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 MRPL58Q14197 206 aaKnown RBP7.13□□□□□ -1.27
CHKA-208ENST00000533910 NBPF10Q6P3W6 841 aaKnown RBP7.13□□□□□ -1.27
CHKA-208ENST00000533910 LRRC69Q6ZNQ3 347 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 BICDL1Q6ZP65 573 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 CFHR5Q9BXR6 569 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 USP35Q9P2H5 1018 aa7.13□□□□□ -1.27
CHKA-208ENST00000533910 DMGDHQ9UI17 866 aaKnown RBP7.13□□□□□ -1.27
CHKA-208ENST00000533910 THRAP3Q9Y2W1 955 aaKnown RBP7.13□□□□□ -1.27
CHKA-208ENST00000533910 ZNF831Q5JPB2 1677 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 RREB1Q92766 1687 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 SPATA31A5Q5VU36 1347 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 SPATA31A7Q8IWB4 1347 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 IDH3AP50213 366 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 CCT4P50991 539 aaKnown RBP7.12□□□□□ -1.27
CHKA-208ENST00000533910 FGD1P98174 961 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 ENOX2Q16206 610 aaKnown RBP7.12□□□□□ -1.27
CHKA-208ENST00000533910 USPL1Q5W0Q7 1092 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 RWDD1Q9H446 243 aaPredicted RBP7.12□□□□□ -1.27
CHKA-208ENST00000533910 CHPF2Q9P2E5 772 aa7.12□□□□□ -1.27
CHKA-208ENST00000533910 DBF4Q9UBU7 674 aaPredicted RBP7.12□□□□□ -1.27
CHKA-208ENST00000533910 FOXD3Q9UJU5 478 aaPredicted RBP7.12□□□□□ -1.27
CHKA-208ENST00000533910 AFDNP55196 1824 aaKnown RBP7.12□□□□□ -1.27
CHKA-208ENST00000533910 BCL9O00512 1426 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 ADCY9O60503 1353 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 SPATA31C2B4DYI2 1134 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 PRPF40AO75400 957 aaKnown RBP7.11□□□□□ -1.27
CHKA-208ENST00000533910 ADAMTS2O95450 1211 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 VAMP1P23763 118 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 MSX1P28360 303 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 CABP4P57796 275 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 SLC39A6Q13433 755 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 ARSJQ5FYB0 599 aaPredicted RBP7.11□□□□□ -1.27
CHKA-208ENST00000533910 PI16Q6UXB8 463 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 SMC5Q8IY18 1101 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 TTC5Q8N0Z6 440 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
CHKA-208ENST00000533910 CCDC155Q8N6L0 562 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 ZNF496Q96IT1 587 aaPredicted RBP7.11□□□□□ -1.27
CHKA-208ENST00000533910 FMNL2Q96PY5 1086 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 ZIC5Q96T25 663 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 GPAMQ9HCL2 828 aa7.11□□□□□ -1.27
CHKA-208ENST00000533910 BCCIPQ9P287 314 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHKA-208ENST00000533910 NHSQ6T4R5 1651 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 PRAMEF22A3QJZ6 481 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 F6X3S4 739 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 TGFBR3LH3BV60 316 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 EIF1AYO14602 144 aaKnown RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 SNRPA1P09661 255 aaKnown RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 GRNP28799 593 aaKnown RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 PSMD2Q13200 908 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 TRIP4Q15650 581 aaPredicted RBP7.1□□□□□ -1.27
CHKA-208ENST00000533910 PROSER3Q2NL68 480 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 LYSMD3Q7Z3D4 306 aa7.1□□□□□ -1.27
CHKA-208ENST00000533910 LRP10Q7Z4F1 713 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms