RNA–Protein interactions for RNA: ENST00000533627.5

TMEM25-228, Transcript of transmembrane protein 25, humanhuman

TSL 2

Gene TMEM25, Length 3,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM25-228ENST00000533627 GGA1Q9UJY5 639 aa13.18□□□□□ -0.3
TMEM25-228ENST00000533627 DOCK2Q92608 1830 aa13.18□□□□□ -0.3
TMEM25-228ENST00000533627 A0A1B0GUL6 1792 aa13.18□□□□□ -0.3
TMEM25-228ENST00000533627 A0A087WWV3 80 aa13.18□□□□□ -0.3
TMEM25-228ENST00000533627 WTAPQ15007 396 aa13.18□□□□□ -0.3
TMEM25-228ENST00000533627 USP28Q96RU2 1077 aa13.18□□□□□ -0.3
TMEM25-228ENST00000533627 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
TMEM25-228ENST00000533627 ERICH2A1L162 156 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 ALX1Q15699 326 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 MXD3Q9BW11 206 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 SALL1Q9NSC2 1324 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 DHX16O60231 1041 aaKnown RBP13.17□□□□□ -0.3
TMEM25-228ENST00000533627 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
TMEM25-228ENST00000533627 DOK7Q18PE1 504 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 ZNF804AQ7Z570 1209 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 DRC7Q8IY82 874 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 KRT23Q9C075 422 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
TMEM25-228ENST00000533627 USP5P45974 858 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
TMEM25-228ENST00000533627 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 C16orf45Q96MC5 204 aaPredicted RBP13.17□□□□□ -0.3
TMEM25-228ENST00000533627 TRIM5Q9C035 493 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 CLSTN2Q9H4D0 955 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 CACNA1SQ13698 1873 aa13.17□□□□□ -0.3
TMEM25-228ENST00000533627 TNKSO95271 1327 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 GUCY1A2P33402 732 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
TMEM25-228ENST00000533627 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 ILDR1Q86SU0 546 aaPredicted RBP13.16□□□□□ -0.3
TMEM25-228ENST00000533627 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
TMEM25-228ENST00000533627 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 GOLGA6L6A8MZA4 724 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 SART3Q15020 963 aaKnown RBP13.16□□□□□ -0.3
TMEM25-228ENST00000533627 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 MAPKAPK5Q8IW41 473 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 TGFBRAP1Q8WUH2 860 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 STAG1Q8WVM7 1258 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 CRNKL1Q9BZJ0 848 aaKnown RBP13.16□□□□□ -0.3
TMEM25-228ENST00000533627 PDGFDQ9GZP0 370 aaPredicted RBP13.16□□□□□ -0.3
TMEM25-228ENST00000533627 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
TMEM25-228ENST00000533627 ME1P48163 572 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 ZNF165P49910 485 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
TMEM25-228ENST00000533627 PLA2G4DQ86XP0 818 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 SMAP1Q8IYB5 467 aaPredicted RBP13.15□□□□□ -0.3
TMEM25-228ENST00000533627 SLC44A5Q8NCS7 719 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 TBC1D16Q8TBP0 767 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
TMEM25-228ENST00000533627 RGL2O15211 777 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
TMEM25-228ENST00000533627 ZNF75DP51815 510 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 EVCP57679 992 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 GTF2IP78347 998 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
TMEM25-228ENST00000533627 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
TMEM25-228ENST00000533627 ATP2B1P20020 1258 aa13.15□□□□□ -0.31
TMEM25-228ENST00000533627 ARID5BQ14865 1188 aa13.15□□□□□ -0.31
TMEM25-228ENST00000533627 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.31
TMEM25-228ENST00000533627 POTEAQ6S8J7 498 aa13.15□□□□□ -0.31
TMEM25-228ENST00000533627 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.31
TMEM25-228ENST00000533627 CHD4Q14839 1912 aa13.15□□□□□ -0.31
TMEM25-228ENST00000533627 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
TMEM25-228ENST00000533627 NAA30Q147X3 362 aaPredicted RBP13.14□□□□□ -0.31
TMEM25-228ENST00000533627 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
TMEM25-228ENST00000533627 ESR2Q92731 530 aa13.14□□□□□ -0.31
TMEM25-228ENST00000533627 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
TMEM25-228ENST00000533627 DDX19AQ9NUU7 478 aaKnown RBP13.14□□□□□ -0.31
TMEM25-228ENST00000533627 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
TMEM25-228ENST00000533627 SEMA3EO15041 775 aa13.14□□□□□ -0.31
TMEM25-228ENST00000533627 TPM3P06753 285 aa13.14□□□□□ -0.31
TMEM25-228ENST00000533627 C11orf57Q6ZUT1 292 aaPredicted RBP13.14□□□□□ -0.31
TMEM25-228ENST00000533627 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
TMEM25-228ENST00000533627 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
TMEM25-228ENST00000533627 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
TMEM25-228ENST00000533627 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM25-228ENST00000533627 RTN1Q16799 776 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
TMEM25-228ENST00000533627 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 ENAHQ8N8S7 591 aaPredicted RBP13.13□□□□□ -0.31
TMEM25-228ENST00000533627 FBXO18Q8NFZ0 1043 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 ZSCAN16Q9H4T2 348 aaPredicted RBP13.13□□□□□ -0.31
TMEM25-228ENST00000533627 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
TMEM25-228ENST00000533627 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 G3V3G9 751 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 CHRNA5P30532 468 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
TMEM25-228ENST00000533627 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
TMEM25-228ENST00000533627 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
TMEM25-228ENST00000533627 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms