RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 KBTBD4Q9NVX7 518 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 PODXL2Q9NZ53 605 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 LEMD3Q9Y2U8 911 aa4.62□□□□□ -1.67
ATM-220ENST00000533526 PRAMEF27A3QJZ7 478 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 PRR19A6NJB7 356 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 CILPO75339 1184 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 NEFMP07197 916 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 ADMP35318 185 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 EIF4A3P38919 411 aaKnown RBP4.61□□□□□ -1.67
ATM-220ENST00000533526 ETF1P62495 437 aaKnown RBP4.61□□□□□ -1.67
ATM-220ENST00000533526 SNAP47Q5SQN1 464 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 LDLRAD1Q5T700 205 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.61□□□□□ -1.67
ATM-220ENST00000533526 HID1Q8IV36 788 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 GOLM1Q8NBJ4 401 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 GATA6Q92908 595 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 PSMG3-AS1Q96PY0 264 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 LGR6Q9HBX8 967 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 KCNQ5Q9NR82 932 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 PIM2Q9P1W9 311 aa4.61□□□□□ -1.67
ATM-220ENST00000533526 SUPT16HQ9Y5B9 1047 aaKnown RBP4.61□□□□□ -1.67
ATM-220ENST00000533526 FAM221AA4D161 298 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 DYNC1LI2O43237 492 aaPredicted RBP4.6□□□□□ -1.67
ATM-220ENST00000533526 LRIG2O94898 1065 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 NTF4P34130 210 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 CAP2P40123 477 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 MPP2Q14168 576 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 BNC2Q6ZN30 1099 aaPredicted RBP4.6□□□□□ -1.67
ATM-220ENST00000533526 MFSD2AQ8NA29 543 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 COPRSQ9NQ92 184 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 ADAM30Q9UKF2 790 aa4.6□□□□□ -1.67
ATM-220ENST00000533526 FAM170BA6NMN3 283 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 F6X3S4 739 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 CYP26A1O43174 497 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 GREM1O60565 184 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 F13A1P00488 732 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 TGFB1P01137 390 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 FOSL1P15407 271 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 GRK4P32298 578 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 FANCCQ00597 558 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 FAM160A1Q05DH4 1040 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 LRP8Q14114 963 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 CWF19L2Q2TBE0 894 aaKnown RBP4.59□□□□□ -1.67
ATM-220ENST00000533526 SLC6A19Q695T7 634 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 FBXL19Q6PCT2 694 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 FAM196AQ6ZSG2 479 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 ZNF765Q7L2R6 523 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 ZNF296Q8WUU4 475 aaPredicted RBP4.59□□□□□ -1.67
ATM-220ENST00000533526 FOXQ1Q9C009 403 aa4.59□□□□□ -1.67
ATM-220ENST00000533526 SCO2A0A1W2PP80 73 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 RECKO95980 971 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 PGRP06401 933 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 FAM87AP0C7U9 286 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 GARTP22102 1010 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 CD97P48960 835 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 CDK8P49336 464 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 CDK5R2Q13319 367 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 MLECQ14165 292 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 USP48Q86UV5 1035 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 MCATQ8IVS2 390 aaKnown RBP4.58□□□□□ -1.68
ATM-220ENST00000533526 MRPL41Q8IXM3 137 aaKnown RBP4.58□□□□□ -1.68
ATM-220ENST00000533526 DUSP23Q9BVJ7 150 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 NT5C1AQ9BXI3 368 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 LRRC3Q9BY71 257 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 MKNK2Q9HBH9 465 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 PRDM10Q9NQV6 1147 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 GTF2IRD1Q9UHL9 959 aa4.58□□□□□ -1.68
ATM-220ENST00000533526 PRR36Q9H6K5 1346 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 HYAL3O43820 417 aaPredicted RBP4.57□□□□□ -1.68
ATM-220ENST00000533526 CST3P01034 146 aaPredicted RBP4.57□□□□□ -1.68
ATM-220ENST00000533526 PLCG1P19174 1290 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 YARSP54577 528 aaKnown RBP4.57□□□□□ -1.68
ATM-220ENST00000533526 SLBPQ14493 270 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATM-220ENST00000533526 TMEM201Q5SNT2 666 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 ARTNQ5T4W7 220 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 REC114Q7Z4M0 266 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 SHISA5Q8N114 240 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 SPON2Q9BUD6 331 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 ZFP64Q9NPA5 681 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 PCMTD2Q9NV79 361 aa4.57□□□□□ -1.68
ATM-220ENST00000533526 KIAA1522Q9P206 1035 aaPredicted RBP4.57□□□□□ -1.68
ATM-220ENST00000533526 UNCXA6NJT0 531 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 KIAA1324LA8MWY0 1029 aaPredicted RBP4.56□□□□□ -1.68
ATM-220ENST00000533526 IGF2BP3O00425 579 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATM-220ENST00000533526 CYP7A1P22680 504 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 SSTR4P31391 388 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 ZNF746Q6NUN9 644 aaPredicted RBP4.56□□□□□ -1.68
ATM-220ENST00000533526 ARHGAP27Q6ZUM4 889 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 ARMCX6Q7L4S7 300 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 DTX1Q86Y01 620 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 KIAA0825Q8IV33 1275 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 ZNF654Q8IZM8 581 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 REXO1Q8N1G1 1221 aaKnown RBP4.56□□□□□ -1.68
ATM-220ENST00000533526 TOP6BLQ8N6T0 577 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 NKD1Q969G9 470 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 TMEM87BQ96K49 555 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 COX4I2Q96KJ9 171 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 FBRSQ9HAH7 460 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 ADAMTS1Q9UHI8 967 aa4.56□□□□□ -1.68
ATM-220ENST00000533526 LEFTY1O75610 366 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms