RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 IFIT2P09913 472 aaKnown RBP18.82■□□□□ 0.6
CPSF1-211ENST00000533492 GPAT2Q6NUI2 795 aa18.82■□□□□ 0.6
CPSF1-211ENST00000533492 TRIM34Q9BYJ4 488 aa18.82■□□□□ 0.6
CPSF1-211ENST00000533492 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
CPSF1-211ENST00000533492 MYO5AQ9Y4I1 1855 aaKnown RBP18.82■□□□□ 0.6
CPSF1-211ENST00000533492 RAB11FIP3O75154 756 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 GNRH1P01148 92 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 PDE3AQ14432 1141 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 NBPF11Q86T75 865 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 SIRT2Q8IXJ6 389 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 CRACR2BQ8N4Y2 399 aaPredicted RBP18.81■□□□□ 0.6
CPSF1-211ENST00000533492 MAGEB6Q8N7X4 407 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 ARHGAP39Q9C0H5 1083 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.81■□□□□ 0.6
CPSF1-211ENST00000533492 PTCH2Q9Y6C5 1203 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 MAST2Q6P0Q8 1798 aa18.81■□□□□ 0.6
CPSF1-211ENST00000533492 DOCK1Q14185 1865 aa18.8■□□□□ 0.6
CPSF1-211ENST00000533492 CYP2C8P10632 490 aa18.8■□□□□ 0.6
CPSF1-211ENST00000533492 CAP2P40123 477 aa18.8■□□□□ 0.6
CPSF1-211ENST00000533492 DYNLL1P63167 89 aaKnown RBP18.8■□□□□ 0.6
CPSF1-211ENST00000533492 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
CPSF1-211ENST00000533492 CCDC84Q86UT8 332 aaPredicted RBP18.8■□□□□ 0.6
CPSF1-211ENST00000533492 CERS3Q8IU89 383 aa18.8■□□□□ 0.6
CPSF1-211ENST00000533492 FOXP4Q8IVH2 680 aaPredicted RBP18.8■□□□□ 0.6
CPSF1-211ENST00000533492 MIGA1Q8NAN2 632 aa18.8■□□□□ 0.6
CPSF1-211ENST00000533492 ARMC5Q96C12 935 aa18.8■□□□□ 0.6
CPSF1-211ENST00000533492 FLT1P17948 1338 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 FMNL1O95466 1100 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-211ENST00000533492 HLA-DOAP06340 250 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 HOXD10P28358 340 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 PSMC4P43686 418 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 USP5P45974 858 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 PRMT2P55345 433 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 SPP2Q13103 211 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-211ENST00000533492 TMED8Q6PL24 325 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-211ENST00000533492 TBC1D2Q9BYX2 928 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 PALD1Q9ULE6 856 aa18.79■□□□□ 0.6
CPSF1-211ENST00000533492 USP17L5A8MUK1 530 aa18.78■□□□□ 0.6
CPSF1-211ENST00000533492 C20orf194Q5TEA3 1177 aa18.78■□□□□ 0.6
CPSF1-211ENST00000533492 ZNF280CQ8ND82 737 aa18.78■□□□□ 0.6
CPSF1-211ENST00000533492 TMEM106CQ9BVX2 250 aa18.78■□□□□ 0.6
CPSF1-211ENST00000533492 AS3MTQ9HBK9 375 aa18.78■□□□□ 0.6
CPSF1-211ENST00000533492 SAP30BPQ9UHR5 308 aaKnown RBP18.78■□□□□ 0.6
CPSF1-211ENST00000533492 SLC45A1Q9Y2W3 748 aa18.78■□□□□ 0.6
CPSF1-211ENST00000533492 ADGRA2Q96PE1 1338 aa18.77■□□□□ 0.6
CPSF1-211ENST00000533492 SMCR8Q8TEV9 937 aaPredicted RBP18.77■□□□□ 0.6
CPSF1-211ENST00000533492 AGTPBP1Q9UPW5 1226 aa18.77■□□□□ 0.6
CPSF1-211ENST00000533492 ASNSP08243 561 aa18.76■□□□□ 0.59
CPSF1-211ENST00000533492 BCRP11274 1271 aa18.76■□□□□ 0.59
CPSF1-211ENST00000533492 RRP1BQ14684 758 aaKnown RBP18.76■□□□□ 0.59
CPSF1-211ENST00000533492 PROCA1Q8NCQ7 364 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-211ENST00000533492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPSF1-211ENST00000533492 TRIM47Q96LD4 638 aa18.76■□□□□ 0.59
CPSF1-211ENST00000533492 DNAJC2Q99543 621 aaKnown RBP18.76■□□□□ 0.59
CPSF1-211ENST00000533492 PNMA3Q9UL41 463 aa18.76■□□□□ 0.59
CPSF1-211ENST00000533492 PHIPQ8WWQ0 1821 aa18.75■□□□□ 0.59
CPSF1-211ENST00000533492 POTEFA5A3E0 1075 aa18.75■□□□□ 0.59
CPSF1-211ENST00000533492 FCGRTP55899 365 aa18.75■□□□□ 0.59
CPSF1-211ENST00000533492 PABPC4Q13310 644 aaKnown RBP eCLIP18.75■□□□□ 0.59
CPSF1-211ENST00000533492 SLC4A8Q2Y0W8 1093 aa18.75■□□□□ 0.59
CPSF1-211ENST00000533492 SLC9C2Q5TAH2 1124 aa18.75■□□□□ 0.59
CPSF1-211ENST00000533492 METTL16Q86W50 562 aaKnown RBP18.75■□□□□ 0.59
CPSF1-211ENST00000533492 ZNF333Q96JL9 665 aa18.75■□□□□ 0.59
CPSF1-211ENST00000533492 SRRDQ9UH36 339 aa18.75■□□□□ 0.59
CPSF1-211ENST00000533492 PTPRFP10586 1907 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 KIAA0100Q14667 2235 aaKnown RBP18.74■□□□□ 0.59
CPSF1-211ENST00000533492 CDK5RAP2Q96SN8 1893 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 MAGEB6P1A0A0J9YX57 407 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 GOLIM4O00461 696 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 OSBPP22059 807 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 CTGFP29279 349 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 HMGCS2P54868 508 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 TREML2Q5T2D2 321 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 RAET1EQ8TD07 263 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 SH3TC2Q8TF17 1288 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 GINM1Q9NU53 330 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 PDE4DIPQ5VU43 2346 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 ZSWIM8A7E2V4 1837 aa18.74■□□□□ 0.59
CPSF1-211ENST00000533492 TNRC18O15417 2968 aaPredicted RBP18.73■□□□□ 0.59
CPSF1-211ENST00000533492 HTTP42858 3142 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 FOCADQ5VW36 1801 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 ATAD5Q96QE3 1844 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 GDF11O95390 407 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 MYCP01106 439 aaPredicted RBP18.73■□□□□ 0.59
CPSF1-211ENST00000533492 TTC6Q86TZ1 520 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 WDR18Q9BV38 432 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 BOLA2Q9H3K6 86 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 DNAJC18Q9H819 358 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 MYPNQ86TC9 1320 aa18.73■□□□□ 0.59
CPSF1-211ENST00000533492 PDE6AP16499 860 aa18.72■□□□□ 0.59
CPSF1-211ENST00000533492 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
CPSF1-211ENST00000533492 TMOD4Q9NZQ9 345 aa18.72■□□□□ 0.59
CPSF1-211ENST00000533492 MYH1P12882 1939 aa18.71■□□□□ 0.59
CPSF1-211ENST00000533492 ATP5JP18859 108 aa18.71■□□□□ 0.59
CPSF1-211ENST00000533492 EN2P19622 333 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-211ENST00000533492 BACE1P56817 501 aa18.71■□□□□ 0.59
CPSF1-211ENST00000533492 SH3D19Q5HYK7 790 aa18.71■□□□□ 0.59
CPSF1-211ENST00000533492 ANKRD13CQ8N6S4 541 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms