RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 LBX1P52954 281 aa24.7■■□□□ 1.55
CCS-208ENST00000533244 PPIL2Q13356 520 aa24.7■■□□□ 1.55
CCS-208ENST00000533244 B4GALNT3Q6L9W6 998 aa24.7■■□□□ 1.55
CCS-208ENST00000533244 CRNKL1Q9BZJ0 848 aaKnown RBP24.7■■□□□ 1.55
CCS-208ENST00000533244 PALD1Q9ULE6 856 aa24.7■■□□□ 1.55
CCS-208ENST00000533244 NAV1Q8NEY1 1877 aa24.7■■□□□ 1.54
CCS-208ENST00000533244 FAM196BA6NMK8 535 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 PPATQ06203 517 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 SCYL3Q8IZE3 742 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.69■■□□□ 1.54
CCS-208ENST00000533244 TSKSQ9UJT2 592 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 CTNND1O60716 968 aaKnown RBP24.69■■□□□ 1.54
CCS-208ENST00000533244 TRPA1O75762 1119 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 MBD4O95243 580 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 DNAJC18Q9H819 358 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 ARMT1Q9H993 441 aa24.69■■□□□ 1.54
CCS-208ENST00000533244 SAP30BPQ9UHR5 308 aaKnown RBP24.69■■□□□ 1.54
CCS-208ENST00000533244 IRF6O14896 467 aa24.68■■□□□ 1.54
CCS-208ENST00000533244 ZFYP08048 801 aaPredicted RBP24.68■■□□□ 1.54
CCS-208ENST00000533244 FOXP4Q8IVH2 680 aaPredicted RBP24.68■■□□□ 1.54
CCS-208ENST00000533244 CFHR5Q9BXR6 569 aa24.68■■□□□ 1.54
CCS-208ENST00000533244 PUS7LQ9H0K6 701 aaKnown RBP24.68■■□□□ 1.54
CCS-208ENST00000533244 IGF2BP3O00425 579 aaKnown RBP eCLIP24.67■■□□□ 1.54
CCS-208ENST00000533244 RNF113AO15541 343 aaKnown RBP24.67■■□□□ 1.54
CCS-208ENST00000533244 GTF2A2P52657 109 aa24.67■■□□□ 1.54
CCS-208ENST00000533244 IFNL1Q8IU54 200 aa24.67■■□□□ 1.54
CCS-208ENST00000533244 KCNH4Q9UQ05 1017 aa24.67■■□□□ 1.54
CCS-208ENST00000533244 HLA-DOAP06340 250 aa24.66■■□□□ 1.54
CCS-208ENST00000533244 RRP1BQ14684 758 aaKnown RBP24.66■■□□□ 1.54
CCS-208ENST00000533244 SDR42E1Q8WUS8 393 aa24.66■■□□□ 1.54
CCS-208ENST00000533244 BRI3BPQ8WY22 251 aa24.66■■□□□ 1.54
CCS-208ENST00000533244 APPBP2Q92624 585 aa24.66■■□□□ 1.54
CCS-208ENST00000533244 PTPN18Q99952 460 aa24.66■■□□□ 1.54
CCS-208ENST00000533244 EHD4Q9H223 541 aa24.66■■□□□ 1.54
CCS-208ENST00000533244 OSBPL3Q9H4L5 887 aa24.66■■□□□ 1.54
CCS-208ENST00000533244 DCP1AQ9NPI6 582 aaPredicted RBP24.66■■□□□ 1.54
CCS-208ENST00000533244 PHIPQ8WWQ0 1821 aa24.65■■□□□ 1.54
CCS-208ENST00000533244 PTPRAP18433 802 aa24.65■■□□□ 1.54
CCS-208ENST00000533244 COL13A1Q5TAT6 717 aaPredicted RBP24.65■■□□□ 1.54
CCS-208ENST00000533244 ATAD5Q96QE3 1844 aa24.65■■□□□ 1.54
CCS-208ENST00000533244 ALDH1A1P00352 501 aa24.64■■□□□ 1.54
CCS-208ENST00000533244 LRRFIP1Q32MZ4 808 aaKnown RBP24.64■■□□□ 1.54
CCS-208ENST00000533244 TTC6Q86TZ1 520 aa24.64■■□□□ 1.54
CCS-208ENST00000533244 PLEKHM2Q8IWE5 1019 aa24.64■■□□□ 1.54
CCS-208ENST00000533244 OSBP2Q969R2 916 aa24.64■■□□□ 1.54
CCS-208ENST00000533244 PICK1Q9NRD5 415 aa24.64■■□□□ 1.54
CCS-208ENST00000533244 ATP8A2Q9NTI2 1148 aa24.64■■□□□ 1.54
CCS-208ENST00000533244 CCL15-CCL14A0A0B4J2E2 113 aa24.63■■□□□ 1.53
CCS-208ENST00000533244 PRKAB2O43741 272 aa24.63■■□□□ 1.53
CCS-208ENST00000533244 CAP2P40123 477 aa24.63■■□□□ 1.53
CCS-208ENST00000533244 SNAPC2Q13487 334 aa24.63■■□□□ 1.53
CCS-208ENST00000533244 CCL15Q16663 113 aa24.63■■□□□ 1.53
CCS-208ENST00000533244 FSD1Q9BTV5 496 aa24.63■■□□□ 1.53
CCS-208ENST00000533244 CETPP11597 493 aa24.62■■□□□ 1.53
CCS-208ENST00000533244 SLC4A8Q2Y0W8 1093 aa24.62■■□□□ 1.53
CCS-208ENST00000533244 CRACR2BQ8N4Y2 399 aaPredicted RBP24.62■■□□□ 1.53
CCS-208ENST00000533244 EVI5LQ96CN4 794 aa24.62■■□□□ 1.53
CCS-208ENST00000533244 STRBPQ96SI9 672 aaKnown RBP24.62■■□□□ 1.53
CCS-208ENST00000533244 SERPINB13Q9UIV8 391 aa24.62■■□□□ 1.53
CCS-208ENST00000533244 CXCL11O14625 94 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 PLCD1P51178 756 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 NOM1Q5C9Z4 860 aaKnown RBP24.61■■□□□ 1.53
CCS-208ENST00000533244 MCM9Q9NXL9 1143 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 AFG3L2Q9Y4W6 797 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 GABPAQ06546 454 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 OTUD7BQ6GQQ9 843 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 TATDN1Q6P1N9 297 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.61■■□□□ 1.53
CCS-208ENST00000533244 ZHX2Q9Y6X8 837 aa24.61■■□□□ 1.53
CCS-208ENST00000533244 PTPRFP10586 1907 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 BAZ2AQ9UIF9 1905 aaKnown RBP24.6■■□□□ 1.53
CCS-208ENST00000533244 TBC1D8O95759 1140 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 MOGSQ13724 837 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 ZMYM1Q5SVZ6 1142 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 TICAM2Q86XR7 235 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 TRIM34Q9BYJ4 488 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 ZCCHC17Q9NP64 241 aaKnown RBP24.6■■□□□ 1.53
CCS-208ENST00000533244 GINM1Q9NU53 330 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 SLC4A4Q9Y6R1 1079 aa24.6■■□□□ 1.53
CCS-208ENST00000533244 M0R2C6 588 aa24.59■■□□□ 1.53
CCS-208ENST00000533244 POLR3DP05423 398 aaPredicted RBP24.59■■□□□ 1.53
CCS-208ENST00000533244 JAG1P78504 1218 aa24.59■■□□□ 1.53
CCS-208ENST00000533244 EVX2Q03828 476 aa24.59■■□□□ 1.53
CCS-208ENST00000533244 FAM43AQ8N2R8 423 aa24.59■■□□□ 1.53
CCS-208ENST00000533244 R3HDMLQ9H3Y0 253 aa24.59■■□□□ 1.53
CCS-208ENST00000533244 TAOK2Q9UL54 1235 aa24.59■■□□□ 1.53
CCS-208ENST00000533244 CASP8AP2Q9UKL3 1982 aa24.58■■□□□ 1.53
CCS-208ENST00000533244 GPAA1O43292 621 aa24.58■■□□□ 1.53
CCS-208ENST00000533244 PDE4AP27815 886 aa24.58■■□□□ 1.53
CCS-208ENST00000533244 CCDC84Q86UT8 332 aaPredicted RBP24.58■■□□□ 1.53
CCS-208ENST00000533244 TBC1D2Q9BYX2 928 aa24.58■■□□□ 1.53
CCS-208ENST00000533244 A0A0G2JLL6 359 aaPredicted RBP24.57■■□□□ 1.52
CCS-208ENST00000533244 BTBD19C9JJ37 291 aa24.57■■□□□ 1.52
CCS-208ENST00000533244 ASNSP08243 561 aa24.57■■□□□ 1.52
CCS-208ENST00000533244 CYP2D6P10635 497 aa24.57■■□□□ 1.52
CCS-208ENST00000533244 PRRT2Q7Z6L0 340 aaPredicted RBP24.57■■□□□ 1.52
CCS-208ENST00000533244 SEC62Q99442 399 aaKnown RBP24.57■■□□□ 1.52
CCS-208ENST00000533244 GSG1L2A8MUP6 293 aa24.56■■□□□ 1.52
CCS-208ENST00000533244 SHMT1P34896 483 aa24.56■■□□□ 1.52
CCS-208ENST00000533244 GIMAP6Q6P9H5 292 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms