RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 ORC4O43929 436 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 HLA-DOAP06340 250 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 CYP2D6P10635 497 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 EPHX2P34913 555 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 TCP10Q12799 353 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 C16orf86Q6ZW13 317 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 APOBEC3FQ8IUX4 373 aaKnown RBP16.7■□□□□ 0.26
HIF3A-215ENST00000533145 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-215ENST00000533145 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 ZC3H15Q8WU90 426 aaKnown RBP16.7■□□□□ 0.26
HIF3A-215ENST00000533145 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
HIF3A-215ENST00000533145 KRT23Q9C075 422 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
HIF3A-215ENST00000533145 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
HIF3A-215ENST00000533145 MYH8P13535 1937 aa16.7■□□□□ 0.26
HIF3A-215ENST00000533145 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-215ENST00000533145 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 PDE4BQ07343 736 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 TRDNQ13061 729 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 TAF1DQ9H5J8 278 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-215ENST00000533145 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
HIF3A-215ENST00000533145 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
HIF3A-215ENST00000533145 EXOSC10Q01780 885 aaKnown RBP16.68■□□□□ 0.26
HIF3A-215ENST00000533145 MAP3K10Q02779 954 aa16.68■□□□□ 0.26
HIF3A-215ENST00000533145 EVX2Q03828 476 aa16.68■□□□□ 0.26
HIF3A-215ENST00000533145 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
HIF3A-215ENST00000533145 PNMA8AQ86V59 439 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-215ENST00000533145 MB21D2Q8IYB1 491 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-215ENST00000533145 FBXL16Q8N461 479 aa16.68■□□□□ 0.26
HIF3A-215ENST00000533145 MTA3Q9BTC8 594 aa16.68■□□□□ 0.26
HIF3A-215ENST00000533145 SWAP70Q9UH65 585 aa16.68■□□□□ 0.26
HIF3A-215ENST00000533145 SERPINB13Q9UIV8 391 aa16.68■□□□□ 0.26
HIF3A-215ENST00000533145 PPP2R3BQ9Y5P8 575 aa16.68■□□□□ 0.26
HIF3A-215ENST00000533145 ASTN2O75129 1339 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-215ENST00000533145 TBC1D12O60347 775 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 RPS6KB1P23443 525 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 CDK8P49336 464 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 RASA3Q14644 834 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 ANGEL2Q5VTE6 544 aaKnown RBP16.67■□□□□ 0.26
HIF3A-215ENST00000533145 TEPSINQ96N21 525 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 TTC14Q96N46 770 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 NEDD4P46934 1319 aa16.67■□□□□ 0.26
HIF3A-215ENST00000533145 VEGFAP15692 232 aaPredicted RBP16.66■□□□□ 0.26
HIF3A-215ENST00000533145 MCM5P33992 734 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 NEK4P51957 841 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 RALYLQ86SE5 291 aaKnown RBP16.66■□□□□ 0.26
HIF3A-215ENST00000533145 ZSCAN29Q8IWY8 852 aaPredicted RBP16.66■□□□□ 0.26
HIF3A-215ENST00000533145 ESR2Q92731 530 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 SNX21Q969T3 373 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 DYNLL2Q96FJ2 89 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 AGXT2Q9BYV1 514 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
HIF3A-215ENST00000533145 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
HIF3A-215ENST00000533145 B4E1Z4 1266 aa16.65■□□□□ 0.26
HIF3A-215ENST00000533145 COL9A3Q14050 684 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-215ENST00000533145 CSRNP1Q96S65 589 aa16.65■□□□□ 0.26
HIF3A-215ENST00000533145 UPF3BQ9BZI7 483 aaKnown RBP16.65■□□□□ 0.26
HIF3A-215ENST00000533145 TMEM39BQ9GZU3 492 aa16.65■□□□□ 0.26
HIF3A-215ENST00000533145 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
HIF3A-215ENST00000533145 ST18O60284 1047 aa16.64■□□□□ 0.25
HIF3A-215ENST00000533145 RASA1P20936 1047 aa16.64■□□□□ 0.25
HIF3A-215ENST00000533145 SLC4A8Q2Y0W8 1093 aa16.64■□□□□ 0.25
HIF3A-215ENST00000533145 TATDN1Q6P1N9 297 aa16.64■□□□□ 0.25
HIF3A-215ENST00000533145 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
HIF3A-215ENST00000533145 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
HIF3A-215ENST00000533145 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
HIF3A-215ENST00000533145 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
HIF3A-215ENST00000533145 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.25
HIF3A-215ENST00000533145 KDM4AO75164 1064 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 CPA1P15085 419 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 SHMT1P34896 483 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 MCM2P49736 904 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 ANTXR2P58335 489 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 CYB5R4Q7L1T6 521 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 TMEM87BQ96K49 555 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 DNAJC18Q9H819 358 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 RRAGCQ9HB90 399 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
HIF3A-215ENST00000533145 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-215ENST00000533145 PRC1O43663 620 aa16.62■□□□□ 0.25
HIF3A-215ENST00000533145 PRDM1O75626 825 aa16.62■□□□□ 0.25
HIF3A-215ENST00000533145 ANKRD1Q15327 319 aa16.62■□□□□ 0.25
HIF3A-215ENST00000533145 RRP12Q5JTH9 1297 aaKnown RBP16.62■□□□□ 0.25
HIF3A-215ENST00000533145 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-215ENST00000533145 IGDCC4Q8TDY8 1250 aa16.62■□□□□ 0.25
HIF3A-215ENST00000533145 TOMM22Q9NS69 142 aa16.62■□□□□ 0.25
HIF3A-215ENST00000533145 RANBP6O60518 1105 aaKnown RBP16.61■□□□□ 0.25
HIF3A-215ENST00000533145 ANP32AP39687 249 aaKnown RBP16.61■□□□□ 0.25
HIF3A-215ENST00000533145 EVCP57679 992 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms