RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 AKNAD1Q5T1N1 836 aa21.82■■□□□ 1.08
SMPD1-208ENST00000533123 AMOTL1Q8IY63 956 aa21.82■■□□□ 1.08
SMPD1-208ENST00000533123 INTS4Q96HW7 963 aaKnown RBP21.82■■□□□ 1.08
SMPD1-208ENST00000533123 ZC3H4Q9UPT8 1303 aaKnown RBP21.81■■□□□ 1.08
SMPD1-208ENST00000533123 MFSD6Q6ZSS7 791 aa21.81■■□□□ 1.08
SMPD1-208ENST00000533123 NKX2-3Q8TAU0 364 aa21.81■■□□□ 1.08
SMPD1-208ENST00000533123 TRPM4Q8TD43 1214 aa21.81■■□□□ 1.08
SMPD1-208ENST00000533123 TPCN1Q9ULQ1 816 aa21.81■■□□□ 1.08
SMPD1-208ENST00000533123 ASTN2O75129 1339 aaPredicted RBP21.81■■□□□ 1.08
SMPD1-208ENST00000533123 STAG1Q8WVM7 1258 aa21.8■■□□□ 1.08
SMPD1-208ENST00000533123 NEDD4P46934 1319 aa21.8■■□□□ 1.08
SMPD1-208ENST00000533123 DCAF8L1A6NGE4 600 aa21.8■■□□□ 1.08
SMPD1-208ENST00000533123 GLTPD2A6NH11 291 aa21.8■■□□□ 1.08
SMPD1-208ENST00000533123 LMOD1P29536 600 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-208ENST00000533123 TOB2Q14106 344 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-208ENST00000533123 DYNLL2Q96FJ2 89 aa21.8■■□□□ 1.08
SMPD1-208ENST00000533123 SCAF8Q9UPN6 1271 aaKnown RBP21.8■■□□□ 1.08
SMPD1-208ENST00000533123 TRDNQ13061 729 aa21.79■■□□□ 1.08
SMPD1-208ENST00000533123 ME3Q16798 604 aa21.79■■□□□ 1.08
SMPD1-208ENST00000533123 NCOA7Q8NI08 942 aa21.79■■□□□ 1.08
SMPD1-208ENST00000533123 TOMM22Q9NS69 142 aa21.79■■□□□ 1.08
SMPD1-208ENST00000533123 DDX60LQ5H9U9 1706 aaKnown RBP21.79■■□□□ 1.08
SMPD1-208ENST00000533123 NPM3O75607 178 aaKnown RBP21.79■■□□□ 1.08
SMPD1-208ENST00000533123 PRDM1O75626 825 aa21.79■■□□□ 1.08
SMPD1-208ENST00000533123 MCM4P33991 863 aa21.79■■□□□ 1.08
SMPD1-208ENST00000533123 RRP12Q5JTH9 1297 aaKnown RBP21.79■■□□□ 1.08
SMPD1-208ENST00000533123 CHST3Q7LGC8 479 aa21.79■■□□□ 1.08
SMPD1-208ENST00000533123 RALYLQ86SE5 291 aaKnown RBP21.79■■□□□ 1.08
SMPD1-208ENST00000533123 ZSCAN29Q8IWY8 852 aaPredicted RBP21.79■■□□□ 1.08
SMPD1-208ENST00000533123 LAMB1P07942 1786 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 DDTLA6NHG4 134 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-208ENST00000533123 B4E1Z4 1266 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 DTNBO60941 627 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 ST3GAL1Q11201 340 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 LRRC2Q9BYS8 371 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 ENTPD3O75355 529 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 HIRAP54198 1017 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-208ENST00000533123 NUCB2P80303 420 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 SH3BP5LQ7L8J4 393 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 TTC6Q86TZ1 520 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 CCDC83Q8IWF9 413 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 RNF41Q9H4P4 317 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-208ENST00000533123 ZDHHC9Q9Y397 364 aa21.78■■□□□ 1.08
SMPD1-208ENST00000533123 SLC3A2P08195 630 aaKnown RBP21.77■■□□□ 1.08
SMPD1-208ENST00000533123 NECAB1Q8N987 351 aa21.77■■□□□ 1.08
SMPD1-208ENST00000533123 L3MBTL3Q96JM7 780 aaPredicted RBP21.77■■□□□ 1.08
SMPD1-208ENST00000533123 HACL1Q9UJ83 578 aa21.77■■□□□ 1.08
SMPD1-208ENST00000533123 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 DHX32Q7L7V1 743 aaKnown RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 SLC44A5Q8NCS7 719 aa21.76■■□□□ 1.07
SMPD1-208ENST00000533123 ALDH8A1Q9H2A2 487 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 ADARB2Q9NS39 739 aaKnown RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 CNTNAP1P78357 1384 aa21.76■■□□□ 1.07
SMPD1-208ENST00000533123 FKBP1CQ5VVH2 108 aa21.76■■□□□ 1.07
SMPD1-208ENST00000533123 Q6ZUG5 572 aa21.76■■□□□ 1.07
SMPD1-208ENST00000533123 MB21D2Q8IYB1 491 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 ZSCAN31Q96LW9 406 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 DHX36Q9H2U1 1008 aaKnown RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 CNNM2Q9H8M5 875 aa21.76■■□□□ 1.07
SMPD1-208ENST00000533123 SH2B1Q9NRF2 756 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-208ENST00000533123 KDM4AO75164 1064 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 FGRP09769 529 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 SLURP2P0DP57 97 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 PDE4BQ07343 736 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 ANKRD1Q15327 319 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 KRT23Q9C075 422 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 ZSWIM5Q9P217 1185 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.75■■□□□ 1.07
SMPD1-208ENST00000533123 ROBO3Q96MS0 1386 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 HLA-DOAP06340 250 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 GSE1Q14687 1217 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 CYB5R4Q7L1T6 521 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 FAM151AQ8WW52 585 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 TMEM39BQ9GZU3 492 aa21.75■■□□□ 1.07
SMPD1-208ENST00000533123 MCM5P33992 734 aa21.74■■□□□ 1.07
SMPD1-208ENST00000533123 EXOSC10Q01780 885 aaKnown RBP21.74■■□□□ 1.07
SMPD1-208ENST00000533123 ANGEL2Q5VTE6 544 aaKnown RBP21.74■■□□□ 1.07
SMPD1-208ENST00000533123 MKNK2Q9HBH9 465 aa21.74■■□□□ 1.07
SMPD1-208ENST00000533123 SERPINB13Q9UIV8 391 aa21.74■■□□□ 1.07
SMPD1-208ENST00000533123 RANBP6O60518 1105 aaKnown RBP21.74■■□□□ 1.07
SMPD1-208ENST00000533123 PCP11498 1178 aaKnown RBP21.74■■□□□ 1.07
SMPD1-208ENST00000533123 ANTXR2P58335 489 aa21.74■■□□□ 1.07
SMPD1-208ENST00000533123 FOXD4L5Q5VV16 416 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-208ENST00000533123 C16orf86Q6ZW13 317 aa21.74■■□□□ 1.07
SMPD1-208ENST00000533123 FAM83AQ86UY5 434 aa21.74■■□□□ 1.07
SMPD1-208ENST00000533123 FOXD4L4Q8WXT5 416 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-208ENST00000533123 PI4KBQ9UBF8 816 aa21.74■■□□□ 1.07
SMPD1-208ENST00000533123 PRC1O43663 620 aa21.73■■□□□ 1.07
SMPD1-208ENST00000533123 CDK8P49336 464 aa21.73■■□□□ 1.07
SMPD1-208ENST00000533123 RASA3Q14644 834 aa21.73■■□□□ 1.07
SMPD1-208ENST00000533123 CDAN1Q8IWY9 1227 aa21.73■■□□□ 1.07
SMPD1-208ENST00000533123 CSRNP1Q96S65 589 aa21.73■■□□□ 1.07
SMPD1-208ENST00000533123 ATRNL1Q5VV63 1379 aa21.73■■□□□ 1.07
SMPD1-208ENST00000533123 ORC4O43929 436 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 GABPAQ06546 454 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 ESR2Q92731 530 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 GBP4Q96PP9 640 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 RTN4Q9NQC3 1192 aaKnown RBP21.72■■□□□ 1.07
SMPD1-208ENST00000533123 GGA3Q9NZ52 723 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms