RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PLCG2P16885 1265 aa21.81■■□□□ 1.08
PCF11-206ENST00000533018 OSBPP22059 807 aa21.81■■□□□ 1.08
PCF11-206ENST00000533018 FCGRTP55899 365 aa21.81■■□□□ 1.08
PCF11-206ENST00000533018 SMCR8Q8TEV9 937 aaPredicted RBP21.81■■□□□ 1.08
PCF11-206ENST00000533018 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
PCF11-206ENST00000533018 ZBED9Q6R2W3 1325 aa21.8■■□□□ 1.08
PCF11-206ENST00000533018 MYPNQ86TC9 1320 aa21.8■■□□□ 1.08
PCF11-206ENST00000533018 MGAMO43451 1857 aa21.8■■□□□ 1.08
PCF11-206ENST00000533018 ZAP70P43403 619 aa21.8■■□□□ 1.08
PCF11-206ENST00000533018 PANK1Q8TE04 598 aa21.8■■□□□ 1.08
PCF11-206ENST00000533018 ATAD5Q96QE3 1844 aa21.8■■□□□ 1.08
PCF11-206ENST00000533018 BCRP11274 1271 aa21.79■■□□□ 1.08
PCF11-206ENST00000533018 MAPKAPK5Q8IW41 473 aa21.79■■□□□ 1.08
PCF11-206ENST00000533018 TGFBRAP1Q8WUH2 860 aa21.79■■□□□ 1.08
PCF11-206ENST00000533018 TRIM34Q9BYJ4 488 aa21.79■■□□□ 1.08
PCF11-206ENST00000533018 TLR7Q9NYK1 1049 aaKnown RBP21.79■■□□□ 1.08
PCF11-206ENST00000533018 PI4KBQ9UBF8 816 aa21.79■■□□□ 1.08
PCF11-206ENST00000533018 BIN2Q9UBW5 565 aaPredicted RBP21.79■■□□□ 1.08
PCF11-206ENST00000533018 DBNLQ9UJU6 430 aaKnown RBP21.79■■□□□ 1.08
PCF11-206ENST00000533018 SLC45A1Q9Y2W3 748 aa21.79■■□□□ 1.08
PCF11-206ENST00000533018 MAST2Q6P0Q8 1798 aa21.79■■□□□ 1.08
PCF11-206ENST00000533018 COL2A1P02458 1487 aaPredicted RBP21.78■■□□□ 1.08
PCF11-206ENST00000533018 SPP2Q13103 211 aa21.78■■□□□ 1.08
PCF11-206ENST00000533018 CEP85Q6P2H3 762 aa21.78■■□□□ 1.08
PCF11-206ENST00000533018 ZNF512BQ96KM6 892 aaPredicted RBP21.78■■□□□ 1.08
PCF11-206ENST00000533018 HERC5Q9UII4 1024 aaKnown RBP21.78■■□□□ 1.08
PCF11-206ENST00000533018 AGTPBP1Q9UPW5 1226 aa21.78■■□□□ 1.08
PCF11-206ENST00000533018 EXOC6BQ9Y2D4 811 aa21.78■■□□□ 1.08
PCF11-206ENST00000533018 GRK4P32298 578 aa21.77■■□□□ 1.08
PCF11-206ENST00000533018 CAP2P40123 477 aa21.77■■□□□ 1.08
PCF11-206ENST00000533018 ADGRA1Q86SQ6 560 aa21.77■■□□□ 1.08
PCF11-206ENST00000533018 ZNF280CQ8ND82 737 aa21.77■■□□□ 1.08
PCF11-206ENST00000533018 EAF2Q96CJ1 260 aaPredicted RBP21.77■■□□□ 1.08
PCF11-206ENST00000533018 DHX36Q9H2U1 1008 aaKnown RBP21.77■■□□□ 1.08
PCF11-206ENST00000533018 PIH1D3Q9NQM4 214 aaKnown RBP21.77■■□□□ 1.08
PCF11-206ENST00000533018 CDK5RAP2Q96SN8 1893 aa21.77■■□□□ 1.08
PCF11-206ENST00000533018 IDH1O75874 414 aaKnown RBP21.76■■□□□ 1.07
PCF11-206ENST00000533018 CYP7A1P22680 504 aa21.76■■□□□ 1.07
PCF11-206ENST00000533018 PPP4CP60510 307 aa21.76■■□□□ 1.07
PCF11-206ENST00000533018 PRKCZQ05513 592 aa21.76■■□□□ 1.07
PCF11-206ENST00000533018 TREML2Q5T2D2 321 aa21.76■■□□□ 1.07
PCF11-206ENST00000533018 ERC1Q8IUD2 1116 aa21.76■■□□□ 1.07
PCF11-206ENST00000533018 CRACR2BQ8N4Y2 399 aaPredicted RBP21.76■■□□□ 1.07
PCF11-206ENST00000533018 PNMA3Q9UL41 463 aa21.76■■□□□ 1.07
PCF11-206ENST00000533018 USP17L5A8MUK1 530 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 HMGCS2P54868 508 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 MTFR1Q15390 333 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 AACSQ86V21 672 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 ANKRD13CQ8N6S4 541 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 BCL11AQ9H165 835 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 AS3MTQ9HBK9 375 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 SAP30BPQ9UHR5 308 aaKnown RBP21.75■■□□□ 1.07
PCF11-206ENST00000533018 FLT1P17948 1338 aa21.75■■□□□ 1.07
PCF11-206ENST00000533018 MS4A1P11836 297 aa21.74■■□□□ 1.07
PCF11-206ENST00000533018 RRP1BQ14684 758 aaKnown RBP21.74■■□□□ 1.07
PCF11-206ENST00000533018 PROCA1Q8NCQ7 364 aaPredicted RBP21.74■■□□□ 1.07
PCF11-206ENST00000533018 TBC1D2Q9BYX2 928 aa21.74■■□□□ 1.07
PCF11-206ENST00000533018 PALD1Q9ULE6 856 aa21.74■■□□□ 1.07
PCF11-206ENST00000533018 GABRQQ9UN88 632 aa21.74■■□□□ 1.07
PCF11-206ENST00000533018 NDUFB9Q9Y6M9 179 aa21.74■■□□□ 1.07
PCF11-206ENST00000533018 FOCADQ5VW36 1801 aa21.73■■□□□ 1.07
PCF11-206ENST00000533018 APBB1O00213 710 aa21.73■■□□□ 1.07
PCF11-206ENST00000533018 TNPO2O14787 897 aaKnown RBP21.73■■□□□ 1.07
PCF11-206ENST00000533018 DYNLL1P63167 89 aaKnown RBP21.73■■□□□ 1.07
PCF11-206ENST00000533018 UBXN2AP68543 259 aa21.73■■□□□ 1.07
PCF11-206ENST00000533018 PABPC4Q13310 644 aaKnown RBP eCLIP21.73■■□□□ 1.07
PCF11-206ENST00000533018 MIGA1Q8NAN2 632 aa21.73■■□□□ 1.07
PCF11-206ENST00000533018 IGSF3O75054 1194 aa21.72■■□□□ 1.07
PCF11-206ENST00000533018 HLA-DOAP06340 250 aa21.72■■□□□ 1.07
PCF11-206ENST00000533018 HSP90AB4PQ58FF6 505 aa21.72■■□□□ 1.07
PCF11-206ENST00000533018 FOXP4Q8IVH2 680 aaPredicted RBP21.72■■□□□ 1.07
PCF11-206ENST00000533018 MAGEB6Q8N7X4 407 aa21.72■■□□□ 1.07
PCF11-206ENST00000533018 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
PCF11-206ENST00000533018 IL1RAPL2Q9NP60 686 aa21.72■■□□□ 1.07
PCF11-206ENST00000533018 TAOK2Q9UL54 1235 aa21.72■■□□□ 1.07
PCF11-206ENST00000533018 SIPA1L1O43166 1804 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 MYH1P12882 1939 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 ASNSP08243 561 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 USP5P45974 858 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 MAP3K12Q12852 859 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 SLAIN1Q8ND83 568 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 RNF208Q9H0X6 261 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 DOCK3Q8IZD9 2030 aa21.71■■□□□ 1.07
PCF11-206ENST00000533018 LOC285556D6RIA3 1793 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 ADCY3O60266 1144 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 GDF11O95390 407 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 CCL5P13501 91 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 FLT3LGP49771 235 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 MTMR2Q13614 643 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 COA7Q96BR5 231 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 ANTXR1Q9H6X2 564 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 TMOD4Q9NZQ9 345 aa21.7■■□□□ 1.06
PCF11-206ENST00000533018 CEP290O15078 2479 aa21.69■■□□□ 1.06
PCF11-206ENST00000533018 NKX2-3Q8TAU0 364 aa21.69■■□□□ 1.06
PCF11-206ENST00000533018 RHPN1Q8TCX5 695 aa21.69■■□□□ 1.06
PCF11-206ENST00000533018 COG6Q9Y2V7 657 aa21.69■■□□□ 1.06
PCF11-206ENST00000533018 ELNP15502 786 aa21.68■■□□□ 1.06
PCF11-206ENST00000533018 FAM110CQ1W6H9 321 aa21.68■■□□□ 1.06
PCF11-206ENST00000533018 CLASRPQ8N2M8 674 aaKnown RBP21.68■■□□□ 1.06
PCF11-206ENST00000533018 WDR18Q9BV38 432 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms