RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 BICDL1Q6ZP65 573 aa20.71■□□□□ 0.91
UBXN1-213ENST00000532904 NBPF5PQ86XG9 351 aaPredicted RBP20.71■□□□□ 0.91
UBXN1-213ENST00000532904 NLRP3Q96P20 1036 aa20.71■□□□□ 0.91
UBXN1-213ENST00000532904 ZNF804BA4D1E1 1349 aa20.71■□□□□ 0.91
UBXN1-213ENST00000532904 ZNF532Q9HCE3 1301 aa20.71■□□□□ 0.91
UBXN1-213ENST00000532904 RAB11FIP4Q86YS3 637 aa20.7■□□□□ 0.9
UBXN1-213ENST00000532904 HSD3B7Q9H2F3 369 aa20.7■□□□□ 0.9
UBXN1-213ENST00000532904 HPSEQ9Y251 543 aa20.7■□□□□ 0.9
UBXN1-213ENST00000532904 ZMYM6O95789 1325 aa20.7■□□□□ 0.9
UBXN1-213ENST00000532904 SYT10Q6XYQ8 523 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 QTRT2Q9H974 415 aaKnown RBP20.69■□□□□ 0.9
UBXN1-213ENST00000532904 FAM237AA0A1B0GTK4 181 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 SNAP23O00161 211 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 IGSF3O75054 1194 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 PPP6R2O75170 966 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 SLFN14P0C7P3 912 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 LMOD1P29536 600 aaPredicted RBP20.69■□□□□ 0.9
UBXN1-213ENST00000532904 BCAMP50895 628 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 ALX1Q15699 326 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 UBR3Q6ZT12 1888 aa20.69■□□□□ 0.9
UBXN1-213ENST00000532904 CCP110O43303 1012 aa20.68■□□□□ 0.9
UBXN1-213ENST00000532904 SYKP43405 635 aa20.68■□□□□ 0.9
UBXN1-213ENST00000532904 WWC3Q9ULE0 1092 aa20.68■□□□□ 0.9
UBXN1-213ENST00000532904 MINPP1Q9UNW1 487 aa20.68■□□□□ 0.9
UBXN1-213ENST00000532904 MARCKSP29966 332 aaPredicted RBP20.68■□□□□ 0.9
UBXN1-213ENST00000532904 RFC4P35249 363 aa20.68■□□□□ 0.9
UBXN1-213ENST00000532904 SMIM5Q71RC9 77 aa20.68■□□□□ 0.9
UBXN1-213ENST00000532904 ALG1Q9BT22 464 aa20.68■□□□□ 0.9
UBXN1-213ENST00000532904 GNL3LQ9NVN8 582 aaKnown RBP20.68■□□□□ 0.9
UBXN1-213ENST00000532904 CBFA2T2O43439 604 aa20.67■□□□□ 0.9
UBXN1-213ENST00000532904 H2AFXP16104 143 aaPredicted RBP20.67■□□□□ 0.9
UBXN1-213ENST00000532904 ZNF771Q7L3S4 317 aaPredicted RBP20.67■□□□□ 0.9
UBXN1-213ENST00000532904 JMYQ8N9B5 988 aa20.67■□□□□ 0.9
UBXN1-213ENST00000532904 STRBPQ96SI9 672 aaKnown RBP20.67■□□□□ 0.9
UBXN1-213ENST00000532904 NBPF3Q9H094 633 aa20.67■□□□□ 0.9
UBXN1-213ENST00000532904 CDKL5O76039 1030 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 RPS8P62241 208 aaKnown RBP20.66■□□□□ 0.9
UBXN1-213ENST00000532904 PTPAQ15257 358 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 SHC4Q6S5L8 630 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 FAM196AQ6ZSG2 479 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 AMIGO3Q86WK7 504 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 ANGEL1Q9UNK9 670 aaKnown RBP20.66■□□□□ 0.9
UBXN1-213ENST00000532904 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.66■□□□□ 0.94e-7■■□□□ 11.4
UBXN1-213ENST00000532904 BRWD3Q6RI45 1802 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 PHLPP2Q6ZVD8 1323 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 ZBTB22O15209 634 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 MYO1BO43795 1136 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 ATP1A3P13637 1013 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 HMGB2P26583 209 aaKnown RBP20.66■□□□□ 0.9
UBXN1-213ENST00000532904 MYL5Q02045 173 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 SLC27A3Q5K4L6 730 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 VPS37DQ86XT2 251 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 AIDAQ96BJ3 306 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 TMX1Q9H3N1 280 aa20.66■□□□□ 0.9
UBXN1-213ENST00000532904 SH2B2O14492 632 aaPredicted RBP20.65■□□□□ 0.9
UBXN1-213ENST00000532904 ETF1P62495 437 aaKnown RBP20.65■□□□□ 0.9
UBXN1-213ENST00000532904 TRDNQ13061 729 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 TERF2Q15554 542 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 KRT40Q6A162 431 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 CELF1Q92879 486 aaKnown RBP20.65■□□□□ 0.9
UBXN1-213ENST00000532904 AIFM3Q96NN9 605 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 ZNF446Q9NWS9 450 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 METAP2P50579 478 aaKnown RBP eCLIP20.65■□□□□ 0.9
UBXN1-213ENST00000532904 UBASH3AP57075 661 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 ERCC6LQ2NKX8 1250 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 RESP18Q5W5W9 173 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 ISM2Q6H9L7 571 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 MAP3K14Q99558 947 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 ANKRD2Q9GZV1 360 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 LRRC4BQ9NT99 713 aa20.65■□□□□ 0.9
UBXN1-213ENST00000532904 CYB5R4Q7L1T6 521 aa20.64■□□□□ 0.89
UBXN1-213ENST00000532904 MAGEB6Q8N7X4 407 aa20.64■□□□□ 0.89
UBXN1-213ENST00000532904 DPF2Q92785 391 aa20.64■□□□□ 0.89
UBXN1-213ENST00000532904 PNPLA7Q6ZV29 1317 aa20.64■□□□□ 0.89
UBXN1-213ENST00000532904 PATL2C9JE40 543 aaKnown RBP20.63■□□□□ 0.89
UBXN1-213ENST00000532904 SEMA3EO15041 775 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 GNAT2P19087 354 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 CAVIN4Q5BKX8 364 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 TBC1D10CQ8IV04 446 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 LRRN4CLQ8ND94 238 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 CHD4Q14839 1912 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 PDS5AQ29RF7 1337 aaKnown RBP20.63■□□□□ 0.89
UBXN1-213ENST00000532904 CPLX2Q6PUV4 134 aaKnown RBP20.63■□□□□ 0.89
UBXN1-213ENST00000532904 FCHSD1Q86WN1 690 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 VSTM4Q8IW00 320 aa20.63■□□□□ 0.89
UBXN1-213ENST00000532904 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.63■□□□□ 0.89
UBXN1-213ENST00000532904 TNRC6CQ9HCJ0 1690 aaKnown RBP20.62■□□□□ 0.89
UBXN1-213ENST00000532904 CUTAO60888 179 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 SERPINC1P01008 464 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 TM4SF1P30408 202 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 PNOCQ13519 176 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 TRIM65Q6PJ69 517 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 APOA5Q6Q788 366 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 DENND2AQ9ULE3 1009 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 MYH13Q9UKX3 1938 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 CDC27P30260 824 aa20.62■□□□□ 0.89
UBXN1-213ENST00000532904 BMS1Q14692 1282 aaKnown RBP20.62■□□□□ 0.89
UBXN1-213ENST00000532904 KRT27Q7Z3Y8 459 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms