RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 EVX2Q03828 476 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL16A1-217ENST00000532877 TNFAIP1Q13829 316 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 SLC4A8Q2Y0W8 1093 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 SBK1Q52WX2 424 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 FAM83AQ86UY5 434 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 APOBEC3FQ8IUX4 373 aaKnown RBP17.01■□□□□ 0.31
COL16A1-217ENST00000532877 KCNB2Q92953 911 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 NBPF3Q9H094 633 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
COL16A1-217ENST00000532877 PITPNM2Q9BZ72 1349 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 MINDY4BA8MYZ0 360 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 SMIM22K7EJ46 135 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 ZNF213O14771 459 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 RBM25P49756 843 aaKnown RBP17■□□□□ 0.31
COL16A1-217ENST00000532877 PPARAQ07869 468 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 C12orf60Q5U649 245 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 RNF20Q5VTR2 975 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 CST9Q5W186 159 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 SH3BP5LQ7L8J4 393 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 AMOTL1Q8IY63 956 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 FAM151AQ8WW52 585 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 CAPNS2Q96L46 248 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 SCAF8Q9UPN6 1271 aaKnown RBP17■□□□□ 0.31
COL16A1-217ENST00000532877 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
COL16A1-217ENST00000532877 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
COL16A1-217ENST00000532877 DDTLA6NHG4 134 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-217ENST00000532877 CCDC85CA6NKD9 419 aa16.99■□□□□ 0.31
COL16A1-217ENST00000532877 POLR3DP05423 398 aaPredicted RBP16.99■□□□□ 0.31
COL16A1-217ENST00000532877 TNNI2P48788 182 aa16.99■□□□□ 0.31
COL16A1-217ENST00000532877 TBC1D10CQ8IV04 446 aa16.99■□□□□ 0.31
COL16A1-217ENST00000532877 RASEFQ8IZ41 740 aa16.99■□□□□ 0.31
COL16A1-217ENST00000532877 TMEM39BQ9GZU3 492 aa16.99■□□□□ 0.31
COL16A1-217ENST00000532877 ANAPC4Q9UJX5 808 aa16.99■□□□□ 0.31
COL16A1-217ENST00000532877 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
COL16A1-217ENST00000532877 ZKSCAN1P17029 563 aaPredicted RBP16.98■□□□□ 0.31
COL16A1-217ENST00000532877 PLCD1P51178 756 aa16.98■□□□□ 0.31
COL16A1-217ENST00000532877 CTDSPL2Q05D32 466 aa16.98■□□□□ 0.31
COL16A1-217ENST00000532877 RASA3Q14644 834 aa16.98■□□□□ 0.31
COL16A1-217ENST00000532877 TTC6Q86TZ1 520 aa16.98■□□□□ 0.31
COL16A1-217ENST00000532877 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
COL16A1-217ENST00000532877 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
COL16A1-217ENST00000532877 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
COL16A1-217ENST00000532877 HLA-DOAP06340 250 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 ANAPC15P60006 121 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 TSGA10IPQ3SY00 556 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 CYP4F22Q6NT55 531 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 STOX1Q6ZVD7 989 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 CDAN1Q8IWY9 1227 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 STAG1Q8WVM7 1258 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 DEFB129Q9H1M3 183 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 PGAP2Q9UHJ9 254 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 ABT1Q9ULW3 272 aaKnown RBP16.97■□□□□ 0.31
COL16A1-217ENST00000532877 TLL2Q9Y6L7 1015 aa16.97■□□□□ 0.31
COL16A1-217ENST00000532877 MAP2K2P36507 400 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 ECE1P42892 770 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
COL16A1-217ENST00000532877 TEPSINQ96N21 525 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 CSRNP1Q96S65 589 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 EHD4Q9H223 541 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 PPP2R3BQ9Y5P8 575 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 TACC3Q9Y6A5 838 aa16.96■□□□□ 0.31
COL16A1-217ENST00000532877 MYH8P13535 1937 aa16.96■□□□□ 0.3
COL16A1-217ENST00000532877 NEDD4P46934 1319 aa16.96■□□□□ 0.3
COL16A1-217ENST00000532877 E7EWF7 191 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 SLC3A2P08195 630 aaKnown RBP16.95■□□□□ 0.3
COL16A1-217ENST00000532877 GABPAQ06546 454 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 KRT32Q14532 448 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 ADCK5Q3MIX3 580 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 AKNAD1Q5T1N1 836 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 C16orf86Q6ZW13 317 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 DYNLL2Q96FJ2 89 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 KIF2CQ99661 725 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 MCOLN1Q9GZU1 580 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 PI4KBQ9UBF8 816 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 SERPINB13Q9UIV8 391 aa16.95■□□□□ 0.3
COL16A1-217ENST00000532877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
COL16A1-217ENST00000532877 ADM5C9JUS6 153 aa16.94■□□□□ 0.3
COL16A1-217ENST00000532877 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
COL16A1-217ENST00000532877 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
COL16A1-217ENST00000532877 SULF1Q8IWU6 871 aa16.94■□□□□ 0.3
COL16A1-217ENST00000532877 SLC44A5Q8NCS7 719 aa16.94■□□□□ 0.3
COL16A1-217ENST00000532877 RNF41Q9H4P4 317 aaPredicted RBP16.94■□□□□ 0.3
COL16A1-217ENST00000532877 DNAJC18Q9H819 358 aa16.94■□□□□ 0.3
COL16A1-217ENST00000532877 INCENPQ9NQS7 918 aa16.94■□□□□ 0.3
COL16A1-217ENST00000532877 AOC2O75106 756 aa16.93■□□□□ 0.3
COL16A1-217ENST00000532877 FGRP09769 529 aa16.93■□□□□ 0.3
COL16A1-217ENST00000532877 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
COL16A1-217ENST00000532877 PCP11498 1178 aaKnown RBP16.93■□□□□ 0.3
COL16A1-217ENST00000532877 PDE4BQ07343 736 aa16.93■□□□□ 0.3
COL16A1-217ENST00000532877 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
COL16A1-217ENST00000532877 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
COL16A1-217ENST00000532877 TSKSQ9UJT2 592 aa16.93■□□□□ 0.3
COL16A1-217ENST00000532877 SSC5DA1L4H1 1573 aa16.93■□□□□ 0.3
COL16A1-217ENST00000532877 FAM196BA6NMK8 535 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 TRAF5O00463 557 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 ORC4O43929 436 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms