RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	TIMM10	P62072	90 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	GSTO1	P78417	241 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	TFCP2	Q12800	502 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	PICALM	Q13492	652 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	RASGRF1	Q13972	1273 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	NOL9	Q5SY16	702 aa	Known RBP	11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ANKRD23	Q86SG2	305 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	XAGE2	Q96GT9	111 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	PARK7	Q99497	189 aa	Known RBP	11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	NOL10	Q9BSC4	688 aa	Known RBP	11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ATAD5	Q96QE3	1844 aa		11.88	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ECM2	O94769	699 aa	Predicted RBP	11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	LDHC	P07864	332 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	BTD	P43251	543 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	OS9	Q13438	667 aa	Predicted RBP	11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ATF7IP	Q6VMQ6	1270 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	FASTKD5	Q7L8L6	764 aa	Known RBP	11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	SCYL3	Q8IZE3	742 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	IDI2	Q9BXS1	227 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	FAM198A	Q9UFP1	575 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	CPA4	Q9UI42	421 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ZNF112	Q9UJU3	913 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	KCNH4	Q9UQ05	1017 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	PTPRF	P10586	1907 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	MAST2	Q6P0Q8	1798 aa		11.87	□□□□□ -0.51
PPFIA1-223	ENST00000532793	MROH7-TTC4	A0A0A0MT08	1334 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	GAK	O14976	1311 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	HR	O43593	1189 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	FMNL1	O95466	1100 aa	Predicted RBP	11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	MYC	P01106	439 aa	Predicted RBP	11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	TRIM27	P14373	513 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	MTX1	Q13505	466 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	RAET1E	Q8TD07	263 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	CLUAP1	Q96AJ1	413 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ZNF333	Q96JL9	665 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	RAI14	Q9P0K7	980 aa		11.86	□□□□□ -0.51
PPFIA1-223	ENST00000532793	CXCL11	O14625	94 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	UQCRFS1P1	P0C7P4	283 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	EN2	P19622	333 aa	Predicted RBP	11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	PSMC4	P43686	418 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ZKSCAN2	Q63HK3	967 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	GADL1	Q6ZQY3	521 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	SPATA5	Q8NB90	893 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ARHGAP39	Q9C0H5	1083 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	LRP2BP	Q9P2M1	347 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ZHX2	Q9Y6X8	837 aa		11.85	□□□□□ -0.51
PPFIA1-223	ENST00000532793	PHIP	Q8WWQ0	1821 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	CTNND1	O60716	968 aa	Known RBP	11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	RGS20	O76081	388 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	MAP4K4	O95819	1239 aa	Predicted RBP	11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	FCGRT	P55899	365 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	MECOM	Q03112	1051 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	CCDC158	Q5M9N0	1113 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	C17orf99	Q6UX52	265 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	ZFPM1	Q8IX07	1006 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	FTSJ3	Q8IY81	847 aa	Known RBP	11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	SH3TC2	Q8TF17	1288 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	TRIM47	Q96LD4	638 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	BIN2	Q9UBW5	565 aa	Predicted RBP	11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	MYPN	Q86TC9	1320 aa		11.84	□□□□□ -0.51
PPFIA1-223	ENST00000532793	GPR75-ASB3	A0A0A6YYF3	556 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	DDTL	A6NHG4	134 aa	Predicted RBP	11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	BCAR3	O75815	825 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PTPRA	P18433	802 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	VASP	P50552	380 aa	Predicted RBP	11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	UBXN2A	P68543	259 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	CAP1	Q01518	475 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TTC39A	Q5SRH9	613 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	NKX2-3	Q8TAU0	364 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	HMG20B	Q9P0W2	317 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	SRRD	Q9UH36	339 aa		11.83	□□□□□ -0.52
PPFIA1-223	ENST00000532793	RFX7	Q2KHR2	1363 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	KIAA0100	Q14667	2235 aa	Known RBP	11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793		A0A0G2JLL6	359 aa	Predicted RBP	11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TRIM75P	A6NK02	468 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PHF20L1	A8MW92	1017 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	BAG3	O95817	575 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	CYP2C8	P10632	490 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	OSBP	P22059	807 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	ARID4A	P29374	1257 aa	Predicted RBP	11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	GRK4	P32298	578 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TRIM34	Q9BYJ4	488 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PNMA3	Q9UL41	463 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	CDK5RAP2	Q96SN8	1893 aa		11.82	□□□□□ -0.52
PPFIA1-223	ENST00000532793	FOCAD	Q5VW36	1801 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	ATRNL1	Q5VV63	1379 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	PNMA6E	A0A0J9YXQ4	647 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TBC1D12	O60347	775 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	NAA16	Q6N069	864 aa	Predicted RBP	11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TBC1D9	Q6ZT07	1266 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	ITPRIP	Q8IWB1	547 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TEX11	Q8IYF3	940 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TMEM57	Q8N5G2	664 aa		11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	NSUN4	Q96CB9	384 aa	Known RBP	11.81	□□□□□ -0.52
PPFIA1-223	ENST00000532793	TBC1D2	Q9BYX2	928 aa		11.81	□□□□□ -0.52

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