RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 TIMM10P62072 90 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 GSTO1P78417 241 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 TFCP2Q12800 502 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 G3BP1Q13283 466 aaKnown RBP eCLIP11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 PICALMQ13492 652 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 RASGRF1Q13972 1273 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 NOL9Q5SY16 702 aaKnown RBP11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 ANKRD23Q86SG2 305 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 XAGE2Q96GT9 111 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 PARK7Q99497 189 aaKnown RBP11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 NOL10Q9BSC4 688 aaKnown RBP11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
PPFIA1-223ENST00000532793 ECM2O94769 699 aaPredicted RBP11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 LDHCP07864 332 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 BTDP43251 543 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 OS9Q13438 667 aaPredicted RBP11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 FASTKD5Q7L8L6 764 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 SCYL3Q8IZE3 742 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 IDI2Q9BXS1 227 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 ZNF112Q9UJU3 913 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 KCNH4Q9UQ05 1017 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 PTPRFP10586 1907 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
PPFIA1-223ENST00000532793 MROH7-TTC4A0A0A0MT08 1334 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 GAKO14976 1311 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 HRO43593 1189 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 TRIM27P14373 513 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 MTX1Q13505 466 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 CLUAP1Q96AJ1 413 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 ZNF333Q96JL9 665 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 RAI14Q9P0K7 980 aa11.86□□□□□ -0.51
PPFIA1-223ENST00000532793 CXCL11O14625 94 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 UQCRFS1P1P0C7P4 283 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 EN2P19622 333 aaPredicted RBP11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 PSMC4P43686 418 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 ZKSCAN2Q63HK3 967 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 SPATA5Q8NB90 893 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 ZHX2Q9Y6X8 837 aa11.85□□□□□ -0.51
PPFIA1-223ENST00000532793 PHIPQ8WWQ0 1821 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 CTNND1O60716 968 aaKnown RBP11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 RGS20O76081 388 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 MAP4K4O95819 1239 aaPredicted RBP11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 FCGRTP55899 365 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 MECOMQ03112 1051 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 CCDC158Q5M9N0 1113 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 C17orf99Q6UX52 265 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 ZFPM1Q8IX07 1006 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 FTSJ3Q8IY81 847 aaKnown RBP11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 SMCR8Q8TEV9 937 aaPredicted RBP11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 SH3TC2Q8TF17 1288 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 BIN2Q9UBW5 565 aaPredicted RBP11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 MYPNQ86TC9 1320 aa11.84□□□□□ -0.51
PPFIA1-223ENST00000532793 GPR75-ASB3A0A0A6YYF3 556 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 DDTLA6NHG4 134 aaPredicted RBP11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 BCAR3O75815 825 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 PTPRAP18433 802 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 UBXN2AP68543 259 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 CAP1Q01518 475 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 HMG20BQ9P0W2 317 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 SRRDQ9UH36 339 aa11.83□□□□□ -0.52
PPFIA1-223ENST00000532793 RFX7Q2KHR2 1363 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 KIAA0100Q14667 2235 aaKnown RBP11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 A0A0G2JLL6 359 aaPredicted RBP11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 TRIM75PA6NK02 468 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 PHF20L1A8MW92 1017 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 BAG3O95817 575 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 CYP2C8P10632 490 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 OSBPP22059 807 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 GRK4P32298 578 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 PRRT2Q7Z6L0 340 aaPredicted RBP11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 CDK5RAP2Q96SN8 1893 aa11.82□□□□□ -0.52
PPFIA1-223ENST00000532793 FOCADQ5VW36 1801 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 PNMA6EA0A0J9YXQ4 647 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 TBC1D12O60347 775 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 HNRNPUQ00839 825 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 NAA16Q6N069 864 aaPredicted RBP11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 ITPRIPQ8IWB1 547 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 TMEM57Q8N5G2 664 aa11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 NSUN4Q96CB9 384 aaKnown RBP11.81□□□□□ -0.52
PPFIA1-223ENST00000532793 TBC1D2Q9BYX2 928 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms