RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 FLT1P17948 1338 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 ZNF532Q9HCE3 1301 aa13.09□□□□□ -0.31
GPATCH4-216ENST00000531900 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.32
GPATCH4-216ENST00000531900 NUCB1Q02818 461 aa13.08□□□□□ -0.32
GPATCH4-216ENST00000531900 MIGA1Q8NAN2 632 aa13.08□□□□□ -0.32
GPATCH4-216ENST00000531900 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
GPATCH4-216ENST00000531900 TGFBRAP1Q8WUH2 860 aa13.08□□□□□ -0.32
GPATCH4-216ENST00000531900 ZKSCAN4Q969J2 545 aaPredicted RBP13.08□□□□□ -0.32
GPATCH4-216ENST00000531900 TAOK2Q9UL54 1235 aa13.08□□□□□ -0.32
GPATCH4-216ENST00000531900 MAGEB6P1A0A0J9YX57 407 aa13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 CTNND1O60716 968 aaKnown RBP13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 INPP5BP32019 993 aa13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 PPIL2Q13356 520 aa13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 ZSCAN29Q8IWY8 852 aaPredicted RBP13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 ZBTB47Q9UFB7 747 aaPredicted RBP13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
GPATCH4-216ENST00000531900 IGF2BP3O00425 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 ZFYP08048 801 aaPredicted RBP13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 GTF2A2P52657 109 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 PDE1AP54750 535 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 EHD4Q9H223 541 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 GINM1Q9NU53 330 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 KCNH4Q9UQ05 1017 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
GPATCH4-216ENST00000531900 IRF6O14896 467 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 LRRFIP1Q32MZ4 808 aaKnown RBP13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 TSHZ3Q63HK5 1081 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 FBXO46Q6PJ61 603 aaPredicted RBP13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 PTPN18Q99952 460 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 CRNKL1Q9BZJ0 848 aaKnown RBP13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 BCL11AQ9H165 835 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 ZCCHC17Q9NP64 241 aaKnown RBP13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 ATP8A2Q9NTI2 1148 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 PTPRFP10586 1907 aa13.05□□□□□ -0.32
GPATCH4-216ENST00000531900 CXCL11O14625 94 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 PTPRAP18433 802 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 CAP2P40123 477 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 USP5P45974 858 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 OTUD5Q96G74 571 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 ERO1AQ96HE7 468 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 DNAJC18Q9H819 358 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 DCP1AQ9NPI6 582 aaPredicted RBP13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 ATAD5Q96QE3 1844 aa13.04□□□□□ -0.32
GPATCH4-216ENST00000531900 CCL15-CCL14A0A0B4J2E2 113 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 HLA-DOAP06340 250 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 SLURP2P0DP57 97 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 CETPP11597 493 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 GABPAQ06546 454 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 CRHR2Q13324 411 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 CCL15Q16663 113 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 TATDN1Q6P1N9 297 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 PLEKHM2Q8IWE5 1019 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 BRI3BPQ8WY22 251 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 APPBP2Q92624 585 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 LNPKQ9C0E8 428 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 ZFYVE28Q9HCC9 887 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 SERPINB13Q9UIV8 391 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 AFG3L2Q9Y4W6 797 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 TRIM17Q9Y577 477 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 NAV1Q8NEY1 1877 aa13.03□□□□□ -0.32
GPATCH4-216ENST00000531900 BAZ2AQ9UIF9 1905 aaKnown RBP13.02□□□□□ -0.32
GPATCH4-216ENST00000531900 MBD4O95243 580 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 CHGBP05060 677 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 SOX10P56693 466 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 SP3Q02447 781 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 MOGSQ13724 837 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 SLFNL1Q499Z3 407 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 OSBP2Q969R2 916 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
GPATCH4-216ENST00000531900 HTTP42858 3142 aa13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 ASNSP08243 561 aa13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 PLCD1P51178 756 aa13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 TAF1CQ15572 869 aaPredicted RBP13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 B4GALNT3Q6L9W6 998 aa13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 PICK1Q9NRD5 415 aa13.01□□□□□ -0.33
GPATCH4-216ENST00000531900 ZHX2Q9Y6X8 837 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms