RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ZNF576Q9H609 170 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 BRD7Q9NPI1 651 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 AVENQ9NQS1 362 aaPredicted RBP5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 GJA3Q9Y6H8 435 aa5.61□□□□□ -1.51
AC055878.1-201ENST00000531858 PHLDB1Q86UU1 1377 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 PRR36Q9H6K5 1346 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 A0A1W2PNR3 127 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 AKAP10O43572 662 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 BRINP1O60477 761 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 MMP20O60882 483 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 ZIC2O95409 532 aaPredicted RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 EYA4O95677 639 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 PSAPP07602 524 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 NAT2P11245 290 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 SETQ01105 290 aaPredicted RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 POU5F1BQ06416 359 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 MRM1Q6IN84 353 aaKnown RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 PASD1Q8IV76 773 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 TEX2Q8IWB9 1127 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 TTC8Q8TAM2 541 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 PPM1EQ8WY54 764 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 JARID2Q92833 1246 aaPredicted RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 KISS1RQ969F8 398 aaPredicted RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 CHMP4CQ96CF2 233 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 KLRG1Q96E93 195 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 NAP1L4Q99733 375 aaKnown RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 TSEN34Q9BSV6 310 aaKnown RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 PUS7LQ9H0K6 701 aaKnown RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 ZNF395Q9H8N7 513 aaPredicted RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 ZIM2Q9NZV7 527 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 GPN3Q9UHW5 284 aaPredicted RBP5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 DNMT3LQ9UJW3 386 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 KCNH4Q9UQ05 1017 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 PCDHB14Q9Y5E9 798 aa5.6□□□□□ -1.51
AC055878.1-201ENST00000531858 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 UPK3BL1B0FP48 263 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 B2RBV5 119 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 UPK3BL2E5RIL1 263 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 SPINT1O43278 529 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 EIF4EBP3O60516 100 aaPredicted RBP5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 PAGE1O75459 146 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 RFPL1O75677 317 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 MAP3K6O95382 1288 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 SLURP2P0DP57 97 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 POU3F2P20265 443 aaPredicted RBP5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 BMP6P22004 513 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 RAB27AP51159 221 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 PURAQ00577 322 aaKnown RBP5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 PIN1Q13526 163 aaPredicted RBP5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 MORC3Q14149 939 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 FAM50AQ14320 339 aaKnown RBP5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 DHCR24Q15392 516 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 GFOD2Q3B7J2 385 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 SLC10A6Q3KNW5 377 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 FAM102BQ5T8I3 360 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 LLGL2Q6P1M3 1020 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 VHLLQ6RSH7 139 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 LINC00528Q8N1L1 170 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 NME8Q8N427 588 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 MEIOBQ8N635 442 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 CEP120Q8N960 986 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 TMEM40Q8WWA1 233 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 ITPKCQ96DU7 683 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 DHRS4Q9BTZ2 278 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 ZFAND3Q9H8U3 227 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 TLR7Q9NYK1 1049 aaKnown RBP5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 PCDHB5Q9Y5E4 795 aa5.59□□□□□ -1.51
AC055878.1-201ENST00000531858 SOS2Q07890 1332 aaPredicted RBP5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 CCDC189A1A4V9 331 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 SUSD5O60279 629 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 WDHD1O75717 1129 aaPredicted RBP5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 SASH3O75995 380 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 MSX1P28360 303 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 PLAURQ03405 335 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 LAMC2Q13753 1193 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 LBRQ14739 615 aaKnown RBP5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 PLA2G4EQ3MJ16 856 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 RNFT1Q5M7Z0 435 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 SYCP2LQ5T4T6 812 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 CLEC4GQ6UXB4 293 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 LRRTM3Q86VH5 581 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 WHAMMQ8TF30 809 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 NANOS1Q8WY41 292 aaKnown RBP5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 DDX1Q92499 740 aaKnown RBP5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 NXPE3Q969Y0 559 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 GSX2Q9BZM3 304 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 TACC3Q9Y6A5 838 aa5.58□□□□□ -1.52
AC055878.1-201ENST00000531858 RARAP10276 462 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 ARNTP27540 789 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 CDC27P30260 824 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 PHKA2P46019 1235 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 FAAP100Q0VG06 881 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 RAPGEF1Q13905 1077 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 C21orf62-AS1Q17RA5 79 aa5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 AXDND1Q5T1B0 1012 aaPredicted RBP5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 CXorf57Q6NSI4 855 aaKnown RBP5.57□□□□□ -1.52
AC055878.1-201ENST00000531858 DGKHQ86XP1 1220 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms